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The map label for this gene is 126173461

Identifier: 126173461

GI number: 126173461

Start: 1406823

End: 1407272

Strand: Reverse

Name: 126173461

Synonym: Sbal_1223

Alternate gene names: NA

Gene position: 1407272-1406823 (Counterclockwise)

Preceding gene: 126173463

Following gene: 126173459

Centisome position: 27.45

GC content: 41.11

Gene sequence:

>450_bases
ATGAAAAAATTACTACTTACTCTCGTTGCCAGTACTCTATTGGCTTCAGCTGCACAGGCACACAATTTCGAAGATTCTAA
AGATGCGATTGAATACCGCCAATCTGCATTTGGTCTTATTGCTTATAACTTCGGCGATATGGCTGCCATGATGAAAGGCA
AAAAACCTTTCGAAGCGGAAACCTTCGCAATGCGCGCAACGAATGTTGCTGCATTATCAAAAATTCCTTTCGAAGGTTTT
ATTGATGGCTCAGACAAAGGCGACACTGAAGCCTTAGCCAAAGTTTGGCAAGACAGAGCTGATTTCGATGCAAAAATGAA
AACTTTCCAAGAGAATGCAGCCATTCTTGCTACTGTTGCTCAAAAAGGTGATCAAGCTGAAATCAAGCAAGCCTTTATGA
ACACAGGAAAAAGCTGTAAAGGTTGTCACGACGTTTATAAGAAAGACTAG

Upstream 100 bases:

>100_bases
ATCCAAACAAAAACTGACAAAAATGCTTCTAGTACATCAAGTTAATTTGTGTACAATAGAAGCGCAATGTCACACTTCGA
CGCTAATTTGTGAGAATACG

Downstream 100 bases:

>100_bases
TTCTATTTAGTTTTTCGTCCATCAAAAAGCCTGCTAATTAGCAGGCTTTTTGTTACTCAAACACTCTGCGTAAAACTATA
GCACTTGCACTATCGGCCAC

Product: cytochrome c, class II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKKLLLTLVASTLLASAAQAHNFEDSKDAIEYRQSAFGLIAYNFGDMAAMMKGKKPFEAETFAMRATNVAALSKIPFEGF
IDGSDKGDTEALAKVWQDRADFDAKMKTFQENAAILATVAQKGDQAEIKQAFMNTGKSCKGCHDVYKKD

Sequences:

>Translated_149_residues
MKKLLLTLVASTLLASAAQAHNFEDSKDAIEYRQSAFGLIAYNFGDMAAMMKGKKPFEAETFAMRATNVAALSKIPFEGF
IDGSDKGDTEALAKVWQDRADFDAKMKTFQENAAILATVAQKGDQAEIKQAFMNTGKSCKGCHDVYKKD
>Mature_149_residues
MKKLLLTLVASTLLASAAQAHNFEDSKDAIEYRQSAFGLIAYNFGDMAAMMKGKKPFEAETFAMRATNVAALSKIPFEGF
IDGSDKGDTEALAKVWQDRADFDAKMKTFQENAAILATVAQKGDQAEIKQAFMNTGKSCKGCHDVYKKD

Specific function: Cytochrome c' is the most widely occurring bacterial c- type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known [H]

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127 [H]

Pfam domain/function: PF01322 Cytochrom_C_2 [H]

EC number: NA

Molecular weight: Translated: 16303; Mature: 16303

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLTLVASTLLASAAQAHNFEDSKDAIEYRQSAFGLIAYNFGDMAAMMKGKKPFEAE
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCCCHH
TFAMRATNVAALSKIPFEGFIDGSDKGDTEALAKVWQDRADFDAKMKTFQENAAILATVA
HHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
QKGDQAEIKQAFMNTGKSCKGCHDVYKKD
HCCCHHHHHHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKKLLLTLVASTLLASAAQAHNFEDSKDAIEYRQSAFGLIAYNFGDMAAMMKGKKPFEAE
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCCCHH
TFAMRATNVAALSKIPFEGFIDGSDKGDTEALAKVWQDRADFDAKMKTFQENAAILATVA
HHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
QKGDQAEIKQAFMNTGKSCKGCHDVYKKD
HCCCHHHHHHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6273892; 2829828 [H]