| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173365
Identifier: 126173365
GI number: 126173365
Start: 1292237
End: 1293868
Strand: Reverse
Name: 126173365
Synonym: Sbal_1124
Alternate gene names: NA
Gene position: 1293868-1292237 (Counterclockwise)
Preceding gene: 126173366
Following gene: 126173364
Centisome position: 25.23
GC content: 48.16
Gene sequence:
>1632_bases ATGCAACAAGCAACTCACACAGCCATTAATAACATTGTCATTGTCGGTGGCGGCACAGCCGGTTGGATAACCGCTGCCCT TTTGGCCGCCGAGCATAATGTCGATAAAGGCCAGCTTGCGCACTCGCCTAAACTCAATATCACATTAATAGAATCCCCCG ATGTGGCCACTATCGGCGTCGGCGAAGGCACTTGGCCTTCGATGCGTAACACCTTAGATAAAATCGGCATCAGCGAAACC GAATTTATCCGCCAATGCGACGCGAGTTTCAAGCAAGGCTCACGCTTTATTCACTGGCAGTACGATGATACTGAACATAC TAAACCATTCGGTTCTAACCAATATTTACATCCCTTTAGCTTACCCCATGGCCATCAAGAGTTAGACTTGTGTCCCTTTT GGTTACCTCACAGTGACAAGGTCAGTTTTGCTCAGGCGGTATCCAACCAAGATACGCTGACTCAGTTAGGACTAGCGCCT AAAACCATTGCGACACCGGAATATCATTTTCAAAACAATTACGGCTATCACTTAGATGCGGGTAAATTTAGCCAACTGTT AATGCAGCATTGCACCGAAAAACTGGGGATCAAGTACATTCGCGATCATGTCAGCCAGGTTCACAGTCATGCCAATGGCG ATATTGAAAGCCTTGCGACCAAAGAACATGGCGTGATCTTAGGCGATATGTTTATCGATTGTTCCGGCACTAAATCATTG CTGCTGGGCGAGCATTTTAACGTGCCCTTCCTCAGCCAAAAAGCTGTGCTGTTTAACGACAGCGCCTTAGCAATACAAGT CCCCTATACCGAAGAAAATAGCCCTATCGCCTCATGCACACTCTCGACGGCGCAGCCCAATGGCTGGATCTGGGATATAG GTTTACCGACTCGCAAAGGCGTGGGTTATGTCTATTCATCAGCCCATTGTAGCGATGACGAGGCTGAACAAACCTTAAGA GCCTATTTAGCCAATGACACATCAACTAAGCCTCAATCGGCATCCAGCAACGCGCTTGATAGTCGTAAACAAGAATGCCG AAAGCTGAATATCAACCCCGGCTACCATGCAAAATGCTGGCAAAACAACTGTATTGCCATCGGCATGGCGGCAGGCTTTA TTGAACCTTTAGAAGCATCAGCATTGGCTTTAGTGGAATGGACGGCGAATACCTTAGCCACGCAACTGCCAACGCATCGC GGCGTAATGGACACGATTGCCCAGCGAGTGAATGAACGCTACGAGCGCCACTGGCAGCAAATCATCGACTTTTTGAAACT GCATTATGTCGTGAGTCGACGCGAAGTAGATGGCTACTGGCGCGATCACCGGGAGGCCGCATCCATCCCAGAAAGATTAC AGCAGCAACTCGAACTATGGCGTTATCAAGCGCCAAGCAGTCACGATATTAGCTACAAAGAACCCTTATTTCCGGCGGCG AGTTTCCAATATGTTCTTTATGGTATGGGCTTTAATACTGCCCTGCCCACCCATATCAAGCCGTCGCAACAGCAAGTTGC CCAAAGACTTTTTAGCGAGAATCAGCAAAAGATCCATGCATTGAGCCAAAGCCTTCCGAGCAATCGCGACCTATTAAACA AGGTCAGGCAATTTGGTTTCCCTAAGATTTAG
Upstream 100 bases:
>100_bases CAGTAAAACTATTCAATGCTAGCGCAATAGTTAACCGCGTTAGTGGTAACGAAAAACATAAAAGCCTTTATAAACAACAA TAAAAGATTAGGCACTCGAT
Downstream 100 bases:
>100_bases CACAAATAACAAAAATAACTCGCGGCAGTGAGAACCAACAAAGGACAAAGGTAACCCTATGAGCCAACACGTATTACTTA ACAGCGTAGATCATAAAGAT
Product: tryptophan halogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MQQATHTAINNIVIVGGGTAGWITAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGVGEGTWPSMRNTLDKIGISET EFIRQCDASFKQGSRFIHWQYDDTEHTKPFGSNQYLHPFSLPHGHQELDLCPFWLPHSDKVSFAQAVSNQDTLTQLGLAP KTIATPEYHFQNNYGYHLDAGKFSQLLMQHCTEKLGIKYIRDHVSQVHSHANGDIESLATKEHGVILGDMFIDCSGTKSL LLGEHFNVPFLSQKAVLFNDSALAIQVPYTEENSPIASCTLSTAQPNGWIWDIGLPTRKGVGYVYSSAHCSDDEAEQTLR AYLANDTSTKPQSASSNALDSRKQECRKLNINPGYHAKCWQNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHR GVMDTIAQRVNERYERHWQQIIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLELWRYQAPSSHDISYKEPLFPAA SFQYVLYGMGFNTALPTHIKPSQQQVAQRLFSENQQKIHALSQSLPSNRDLLNKVRQFGFPKI
Sequences:
>Translated_543_residues MQQATHTAINNIVIVGGGTAGWITAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGVGEGTWPSMRNTLDKIGISET EFIRQCDASFKQGSRFIHWQYDDTEHTKPFGSNQYLHPFSLPHGHQELDLCPFWLPHSDKVSFAQAVSNQDTLTQLGLAP KTIATPEYHFQNNYGYHLDAGKFSQLLMQHCTEKLGIKYIRDHVSQVHSHANGDIESLATKEHGVILGDMFIDCSGTKSL LLGEHFNVPFLSQKAVLFNDSALAIQVPYTEENSPIASCTLSTAQPNGWIWDIGLPTRKGVGYVYSSAHCSDDEAEQTLR AYLANDTSTKPQSASSNALDSRKQECRKLNINPGYHAKCWQNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHR GVMDTIAQRVNERYERHWQQIIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLELWRYQAPSSHDISYKEPLFPAA SFQYVLYGMGFNTALPTHIKPSQQQVAQRLFSENQQKIHALSQSLPSNRDLLNKVRQFGFPKI >Mature_543_residues MQQATHTAINNIVIVGGGTAGWITAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGVGEGTWPSMRNTLDKIGISET EFIRQCDASFKQGSRFIHWQYDDTEHTKPFGSNQYLHPFSLPHGHQELDLCPFWLPHSDKVSFAQAVSNQDTLTQLGLAP KTIATPEYHFQNNYGYHLDAGKFSQLLMQHCTEKLGIKYIRDHVSQVHSHANGDIESLATKEHGVILGDMFIDCSGTKSL LLGEHFNVPFLSQKAVLFNDSALAIQVPYTEENSPIASCTLSTAQPNGWIWDIGLPTRKGVGYVYSSAHCSDDEAEQTLR AYLANDTSTKPQSASSNALDSRKQECRKLNINPGYHAKCWQNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHR GVMDTIAQRVNERYERHWQQIIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLELWRYQAPSSHDISYKEPLFPAA SFQYVLYGMGFNTALPTHIKPSQQQVAQRLFSENQQKIHALSQSLPSNRDLLNKVRQFGFPKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006905 [H]
Pfam domain/function: PF04820 Trp_halogenase [H]
EC number: NA
Molecular weight: Translated: 60873; Mature: 60873
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQATHTAINNIVIVGGGTAGWITAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGV CCCHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEC GEGTWPSMRNTLDKIGISETEFIRQCDASFKQGSRFIHWQYDDTEHTKPFGSNQYLHPFS CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC LPHGHQELDLCPFWLPHSDKVSFAQAVSNQDTLTQLGLAPKTIATPEYHFQNNYGYHLDA CCCCCCCCCCCEEECCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCEECCCCCEEECC GKFSQLLMQHCTEKLGIKYIRDHVSQVHSHANGDIESLATKEHGVILGDMFIDCSGTKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCE LLGEHFNVPFLSQKAVLFNDSALAIQVPYTEENSPIASCTLSTAQPNGWIWDIGLPTRKG EECCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCC VGYVYSSAHCSDDEAEQTLRAYLANDTSTKPQSASSNALDSRKQECRKLNINPGYHAKCW CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEC QNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHRGVMDTIAQRVNERYERHWQQ CCCCEEEEEHHCCCCHHCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH IIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLELWRYQAPSSHDISYKEPLFPAA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SFQYVLYGMGFNTALPTHIKPSQQQVAQRLFSENQQKIHALSQSLPSNRDLLNKVRQFGF CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCC PKI CCC >Mature Secondary Structure MQQATHTAINNIVIVGGGTAGWITAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGV CCCHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEC GEGTWPSMRNTLDKIGISETEFIRQCDASFKQGSRFIHWQYDDTEHTKPFGSNQYLHPFS CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC LPHGHQELDLCPFWLPHSDKVSFAQAVSNQDTLTQLGLAPKTIATPEYHFQNNYGYHLDA CCCCCCCCCCCEEECCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCEECCCCCEEECC GKFSQLLMQHCTEKLGIKYIRDHVSQVHSHANGDIESLATKEHGVILGDMFIDCSGTKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCE LLGEHFNVPFLSQKAVLFNDSALAIQVPYTEENSPIASCTLSTAQPNGWIWDIGLPTRKG EECCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCC VGYVYSSAHCSDDEAEQTLRAYLANDTSTKPQSASSNALDSRKQECRKLNINPGYHAKCW CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEC QNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHRGVMDTIAQRVNERYERHWQQ CCCCEEEEEHHCCCCHHCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH IIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLELWRYQAPSSHDISYKEPLFPAA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SFQYVLYGMGFNTALPTHIKPSQQQVAQRLFSENQQKIHALSQSLPSNRDLLNKVRQFGF CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCC PKI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]