| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173364
Identifier: 126173364
GI number: 126173364
Start: 1291456
End: 1292178
Strand: Reverse
Name: 126173364
Synonym: Sbal_1123
Alternate gene names: NA
Gene position: 1292178-1291456 (Counterclockwise)
Preceding gene: 126173365
Following gene: 126173363
Centisome position: 25.2
GC content: 42.6
Gene sequence:
>723_bases ATGAGCCAACACGTATTACTTAACAGCGTAGATCATAAAGATATTAAAATTATCACTGAGCGTAGTGCTAAGTACGGCGA TAATGTCTGGTTCAGTGTCACCTTTCCGGCGGAGTTTCGCAGTGTACAGGCGCATTATCCGATTTTTTTCCAAAAGGATC AGACCACAGGTCAGTTCTTTGCGGTGGCACTTTATGGTTTTCAAAATAATGAGAATCTGTTTTTAAATAACGGCACTTGG CAGGCTTCTTATATTCCTCTCACCCAACGTCGTCAGCCATTTCTTATTGGTCAGCAAAGTGTACGCGAAGACGGTGTCGA GCGGAAACAAAGGGTCATACACATCGATATAGCGAGCCCAAGGGTTAGCACAACCGAAGGTGAAGCTTTGTTTCACCCTT ATGGTGGTAATACTCAATATCTGGATGACATTGGGGATATGTTAGAAGGTATTCACCACGGGCTTATCGACAGCAAACAC TTTATCGATTTACTTATCGAGCATCAGTTGCTTGAATCCTTTACCTTAGATGTTAAGCTCGACAATGGTCAACAGCATCA AATGATGGGGTTCTATACGATTAATGAAGACACATTAGCCTCTCTATCTGCCGAAGTGCTGGCCCAATTACACATCAAAG ATTACTTGAAAGCGATTTATATGGCGTTGGCATCACAGGCCAGAGTGCGTGACTTACTTAACCTTAAAAATGCGCAAGGT TAA
Upstream 100 bases:
>100_bases CTATTAAACAAGGTCAGGCAATTTGGTTTCCCTAAGATTTAGCACAAATAACAAAAATAACTCGCGGCAGTGAGAACCAA CAAAGGACAAAGGTAACCCT
Downstream 100 bases:
>100_bases TTTAGGCCGCAACCATGAGTATTGATGTGATGGAACACAAAGCAAATGTAGTTAAAACAATTGATAACTGCTCAACTGAA GAGATGCTTTCGCTCATTCA
Product: SapC family protein
Products: NA
Alternate protein names: SapC-Related Protein; SapC Related Protein; SapC-Like Protein; SapC Protein; SapC Superfamily Protein; SapC Superfamily; Sapc Family Protein
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQTTGQFFAVALYGFQNNENLFLNNGTW QASYIPLTQRRQPFLIGQQSVREDGVERKQRVIHIDIASPRVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKH FIDLLIEHQLLESFTLDVKLDNGQQHQMMGFYTINEDTLASLSAEVLAQLHIKDYLKAIYMALASQARVRDLLNLKNAQG
Sequences:
>Translated_240_residues MSQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQTTGQFFAVALYGFQNNENLFLNNGTW QASYIPLTQRRQPFLIGQQSVREDGVERKQRVIHIDIASPRVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKH FIDLLIEHQLLESFTLDVKLDNGQQHQMMGFYTINEDTLASLSAEVLAQLHIKDYLKAIYMALASQARVRDLLNLKNAQG >Mature_239_residues SQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQTTGQFFAVALYGFQNNENLFLNNGTWQ ASYIPLTQRRQPFLIGQQSVREDGVERKQRVIHIDIASPRVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKHF IDLLIEHQLLESFTLDVKLDNGQQHQMMGFYTINEDTLASLSAEVLAQLHIKDYLKAIYMALASQARVRDLLNLKNAQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27413; Mature: 27282
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQTTGQFF CCCCEEEECCCCCCEEEEEECCCCCCCCEEEEEECCHHHHCEECCCCEEEECCCCCCEEE AVALYGFQNNENLFLNNGTWQASYIPLTQRRQPFLIGQQSVREDGVERKQRVIHIDIASP EEEEEEEECCCEEEEECCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHHEEEEEEECCC RVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKHFIDLLIEHQLLESFTLDVKL CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEE DNGQQHQMMGFYTINEDTLASLSAEVLAQLHIKDYLKAIYMALASQARVRDLLNLKNAQG CCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQTTGQFF CCCEEEECCCCCCEEEEEECCCCCCCCEEEEEECCHHHHCEECCCCEEEECCCCCCEEE AVALYGFQNNENLFLNNGTWQASYIPLTQRRQPFLIGQQSVREDGVERKQRVIHIDIASP EEEEEEEECCCEEEEECCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHHEEEEEEECCC RVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKHFIDLLIEHQLLESFTLDVKL CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEE DNGQQHQMMGFYTINEDTLASLSAEVLAQLHIKDYLKAIYMALASQARVRDLLNLKNAQG CCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA