| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is sseA [H]
Identifier: 126173341
GI number: 126173341
Start: 1267358
End: 1267816
Strand: Direct
Name: sseA [H]
Synonym: Sbal_1100
Alternate gene names: 126173341
Gene position: 1267358-1267816 (Clockwise)
Preceding gene: 126173340
Following gene: 126173342
Centisome position: 24.72
GC content: 47.71
Gene sequence:
>459_bases ATGGAATACCCACTTGTTAGTACGCAGTGGCTCGAAGCACATCTCACCGATCCCCATTTAGTCTTGCTCGATGCCAGTAT GGAAACCGTTATTGGTAAAGAACCTCTGGTTTACGATGAGCCTATTTGCATTCCGCGCTCACGTCGATTCGACTTGGAAA GTGTGTTTTGCGATAAAACTTCAACTCAAATCCATGCCTTGCCGACGTTTGAGCAATTCAGCCAAGGGATAGCGCAACTT GGGATTGAGGCCGACAGTGTTATCGTTATCTATGATAACCAAGGCATTTATTCAGCCCCACGGGCGTGGTGGACCTTTAA AGTCATGGGTTTTAATCGAGTCTATGTACTCGATGGTGGCTTGCCTCAGTGGATTGAAGAAGACTGCATCACCTCATCAC CTCATCGCGTTATCAAGCCGAAGGCGTCGATTACGGCCCGACGGATATCGATACATTAG
Upstream 100 bases:
>100_bases TAAAATCCCAAAGCAGACAATTTGTTAAGCCGATATTTGGGCTTTACGGCATTTGATGAGAGACTAGCGGCAGACTTGGA TAACAGTAAAAGGACCCGCT
Downstream 100 bases:
>100_bases CTGATGTGCTGCAATACCACCCCGAGCGGGTGATGGATGCCGAGGCCGTGTTATCACGTATCGAAGATGCCGAAACCGCG ATTGTCGATGCCCGTGGTGC
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLESVFCDKTSTQIHALPTFEQFSQGIAQL GIEADSVIVIYDNQGIYSAPRAWWTFKVMGFNRVYVLDGGLPQWIEEDCITSSPHRVIKPKASITARRISIH
Sequences:
>Translated_152_residues MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLESVFCDKTSTQIHALPTFEQFSQGIAQL GIEADSVIVIYDNQGIYSAPRAWWTFKVMGFNRVYVLDGGLPQWIEEDCITSSPHRVIKPKASITARRISIH >Mature_152_residues MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLESVFCDKTSTQIHALPTFEQFSQGIAQL GIEADSVIVIYDNQGIYSAPRAWWTFKVMGFNRVYVLDGGLPQWIEEDCITSSPHRVIKPKASITARRISIH
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=136, Percent_Identity=39.7058823529412, Blast_Score=88, Evalue=3e-18, Organism=Homo sapiens, GI61835204, Length=136, Percent_Identity=39.7058823529412, Blast_Score=88, Evalue=4e-18, Organism=Homo sapiens, GI194473681, Length=136, Percent_Identity=39.7058823529412, Blast_Score=88, Evalue=4e-18, Organism=Homo sapiens, GI17402865, Length=140, Percent_Identity=34.2857142857143, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87082121, Length=128, Percent_Identity=34.375, Blast_Score=87, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324825, Length=76, Percent_Identity=39.4736842105263, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 17304; Mature: 17304
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLESVFCDKT CCCCCCCHHHHEEECCCCEEEEEECCHHHHCCCCCCEECCCCCCCCCCCCCHHHEECCCC STQIHALPTFEQFSQGIAQLGIEADSVIVIYDNQGIYSAPRAWWTFKVMGFNRVYVLDGG CCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECC LPQWIEEDCITSSPHRVIKPKASITARRISIH CHHHHHHHHCCCCCCEEECCCCCEEEEEEEEC >Mature Secondary Structure MEYPLVSTQWLEAHLTDPHLVLLDASMETVIGKEPLVYDEPICIPRSRRFDLESVFCDKT CCCCCCCHHHHEEECCCCEEEEEECCHHHHCCCCCCEECCCCCCCCCCCCCHHHEECCCC STQIHALPTFEQFSQGIAQLGIEADSVIVIYDNQGIYSAPRAWWTFKVMGFNRVYVLDGG CCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECC LPQWIEEDCITSSPHRVIKPKASITARRISIH CHHHHHHHHCCCCCCEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]