| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is sseA [H]
Identifier: 126173342
GI number: 126173342
Start: 1267822
End: 1268223
Strand: Direct
Name: sseA [H]
Synonym: Sbal_1101
Alternate gene names: 126173342
Gene position: 1267822-1268223 (Clockwise)
Preceding gene: 126173341
Following gene: 126173343
Centisome position: 24.73
GC content: 53.98
Gene sequence:
>402_bases GTGCTGCAATACCACCCCGAGCGGGTGATGGATGCCGAGGCCGTGTTATCACGTATCGAAGATGCCGAAACCGCGATTGT CGATGCCCGTGGTGCGCCACGCTTTTTAGGCCAAGTGAGTGAGCCGCGCCCCGGTGTGCGCTCAGGGCATATTCCTCGCT CGGTTAACTTACCCTTCGCTCAAGTGCTCGATGGCAATAAAATAAAAACGACCAGTGAGTTACAGGCTATTTATCAAGGA TTAGCAGCGGACAAGTCCGCACGGATATTTAGCTGTGGCTCTGGGATTACTGCGTGTATTTTGATCTTGGCTTCGGTTGC GGCAGGGCATACACATCCCATCCTCTATGATGGCTCGTGGGCGGATTGGGGCAGTCGTACTGATCTGCCGATTGAGTGCT AA
Upstream 100 bases:
>100_bases CTCAGTGGATTGAAGAAGACTGCATCACCTCATCACCTCATCGCGTTATCAAGCCGAAGGCGTCGATTACGGCCCGACGG ATATCGATACATTAGCTGAT
Downstream 100 bases:
>100_bases TTGGGTAGTTATTGATTGAGTCAATGCATTTTTGAGCATTATGTCTTTGCAGTGTCGTAACCGCTGCGTCGTTTGGCTAG ATCACTAAGGAGGATCCCTT
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MLQYHPERVMDAEAVLSRIEDAETAIVDARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFAQVLDGNKIKTTSELQAIYQG LAADKSARIFSCGSGITACILILASVAAGHTHPILYDGSWADWGSRTDLPIEC
Sequences:
>Translated_133_residues MLQYHPERVMDAEAVLSRIEDAETAIVDARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFAQVLDGNKIKTTSELQAIYQG LAADKSARIFSCGSGITACILILASVAAGHTHPILYDGSWADWGSRTDLPIEC >Mature_133_residues MLQYHPERVMDAEAVLSRIEDAETAIVDARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFAQVLDGNKIKTTSELQAIYQG LAADKSARIFSCGSGITACILILASVAAGHTHPILYDGSWADWGSRTDLPIEC
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI61835204, Length=126, Percent_Identity=34.9206349206349, Blast_Score=83, Evalue=5e-17, Organism=Homo sapiens, GI194473681, Length=126, Percent_Identity=34.9206349206349, Blast_Score=83, Evalue=5e-17, Organism=Homo sapiens, GI194473668, Length=126, Percent_Identity=34.9206349206349, Blast_Score=83, Evalue=5e-17, Organism=Homo sapiens, GI17402865, Length=119, Percent_Identity=39.4957983193277, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI87082121, Length=131, Percent_Identity=43.5114503816794, Blast_Score=115, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324825, Length=135, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 14314; Mature: 14314
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQYHPERVMDAEAVLSRIEDAETAIVDARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFA CCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHH QVLDGNKIKTTSELQAIYQGLAADKSARIFSCGSGITACILILASVAAGHTHPILYDGSW HHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCC ADWGSRTDLPIEC CCCCCCCCCCCCC >Mature Secondary Structure MLQYHPERVMDAEAVLSRIEDAETAIVDARGAPRFLGQVSEPRPGVRSGHIPRSVNLPFA CCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHH QVLDGNKIKTTSELQAIYQGLAADKSARIFSCGSGITACILILASVAAGHTHPILYDGSW HHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCC ADWGSRTDLPIEC CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]