| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173198
Identifier: 126173198
GI number: 126173198
Start: 1094120
End: 1094677
Strand: Direct
Name: 126173198
Synonym: Sbal_0954
Alternate gene names: NA
Gene position: 1094120-1094677 (Clockwise)
Preceding gene: 126173197
Following gene: 126173199
Centisome position: 21.34
GC content: 48.92
Gene sequence:
>558_bases ATGAAGCCTGAAATGACCGAACAAGAACAACGTTTAAGAGACAAGCTTTTACCTGAGATAGAAGCCTTCAAACAGCAAAG GGAAACCTTGCAACTGGCCACGCTAGGTATTGATGGCCAGCCGAATGCGAGTTATGCACCCTTCGCACTGGCCGATGACG GTTTTTATATTCTAGTGAGTGACTTAGCCCGTCATGGTCATAACTTAAAGCACTCATCTAAGGTCTCTGTGATGCTTGTT GAAGATGAAACCGCGGCCAAATCGGTTTTTGCCCGCAAGCGTTTGACCTTCGATGCGATTGCCGAGGCCGTGCCCCGTTA TACGCCCGCCTTTATTAAGGGCGTTAGTGTGTTATCGGCCCGTTTTGGCGAAATGTCCGATAACCTTGCGGCATTAACCG ATTTTAACTTATACAAGCTCGCGCCCCATCAAGGTCTTTATGTGAAAGGTTTTGGCCAAGCATTTAGCCTGAGCGGCGCA GAGTTGTTAGATGTGGATTGGAAGCGTGATGGCCACCATGGCACGCCAAAAACGCCGGAAAACCAGCAAGTCGCTTAA
Upstream 100 bases:
>100_bases AACAAGTTCGCCAATTTAAAGCGCTCGCGACTGCCTTTGCCTCGGTGTAGTCACACCTCTGAATTGCAGCATTAACGACA GTATTTAAGGAACACAGCAA
Downstream 100 bases:
>100_bases GTCGCGCTAAGCGATGGCAATAAAACCAACCCGCACTCGCTGCGGGTTGGTTTTATGTTTTTCTTTTGAGTAAAACCACG CTTTGCCCTTGAATTTTCCC
Product: pyridoxamine 5'-phosphate oxidase-related FMN-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVSDLARHGHNLKHSSKVSVMLV EDETAAKSVFARKRLTFDAIAEAVPRYTPAFIKGVSVLSARFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGA ELLDVDWKRDGHHGTPKTPENQQVA
Sequences:
>Translated_185_residues MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVSDLARHGHNLKHSSKVSVMLV EDETAAKSVFARKRLTFDAIAEAVPRYTPAFIKGVSVLSARFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGA ELLDVDWKRDGHHGTPKTPENQQVA >Mature_185_residues MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVSDLARHGHNLKHSSKVSVMLV EDETAAKSVFARKRLTFDAIAEAVPRYTPAFIKGVSVLSARFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGA ELLDVDWKRDGHHGTPKTPENQQVA
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019595 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR014419 [H]
Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 20517; Mature: 20517
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVS CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEECCCCEEEEH DLARHGHNLKHSSKVSVMLVEDETAAKSVFARKRLTFDAIAEAVPRYTPAFIKGVSVLSA HHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHH RFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGAELLDVDWKRDGHHGTPKTPE HHCCCCCCEEEEECCCEEEECCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCC NQQVA CCCCC >Mature Secondary Structure MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVS CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEECCCCEEEEH DLARHGHNLKHSSKVSVMLVEDETAAKSVFARKRLTFDAIAEAVPRYTPAFIKGVSVLSA HHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHH RFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGAELLDVDWKRDGHHGTPKTPE HHCCCCCCEEEEECCCEEEECCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCC NQQVA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]