| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173197
Identifier: 126173197
GI number: 126173197
Start: 1093440
End: 1094069
Strand: Direct
Name: 126173197
Synonym: Sbal_0953
Alternate gene names: NA
Gene position: 1093440-1094069 (Clockwise)
Preceding gene: 126173196
Following gene: 126173198
Centisome position: 21.33
GC content: 49.37
Gene sequence:
>630_bases ATGCCAAGTCACTCAATAGTCACTACCGCTGGAGACAGTAAAATGAAGATGACACTCGATAGCGAGCTCGATGTCGCGCC AGATTTAGGTTCTGAGCAACGTCAGCTAAGTGAGCAAAATCAGCCAAGTGAGCAACAGGCGCAACTGCGACAACGATTTG AGCAACAAGCTGATTTAATGCCAGCGCAGCTCGCTAGTGAATTAGGCATTGCCGAGCTCGAAGTCGTTGCCGCCTTGCCG CCCGAACAAGTGGTGTTTGTGCCGTTAACTCAGCTCGATACCTTACTGCAAGCCTTACCCGAATGGGGAAAGTTAACCAC TATTGTGATGTTGTCGGGCAGTGTATTTGAATTTAAAGGGGATTTTCCCGATGGAAAATACGCCCACGGTTATTACAACC TCTACAGCAAGGGCGACGGTTTGCACGGGCATCTCAAATTAGAAGCCATGCGTGGCATCGCTTTGATCAGCAGACCTTTT AGAGGCAGCGAGAGCCATTCGATTAACTTCTTCGGCAGCGAAGGTGAGGTCGTGTTCAAAGTGTATTTAGGTCGCGATAA ACAAAGAGCGCTGTTTCCTGAACAAGTTCGCCAATTTAAAGCGCTCGCGACTGCCTTTGCCTCGGTGTAG
Upstream 100 bases:
>100_bases CGCGCTATATGTTCTAAGCCTTGCATTAAAGTGCTGACTTCCGTTTCGGCAAATGCTTAGTGTTAAATCTGAGCAAGCGG TATACGGGAGTCAGCGTTTA
Downstream 100 bases:
>100_bases TCACACCTCTGAATTGCAGCATTAACGACAGTATTTAAGGAACACAGCAAATGAAGCCTGAAATGACCGAACAAGAACAA CGTTTAAGAGACAAGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Heme Utilization Protein HuvX; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MPSHSIVTTAGDSKMKMTLDSELDVAPDLGSEQRQLSEQNQPSEQQAQLRQRFEQQADLMPAQLASELGIAELEVVAALP PEQVVFVPLTQLDTLLQALPEWGKLTTIVMLSGSVFEFKGDFPDGKYAHGYYNLYSKGDGLHGHLKLEAMRGIALISRPF RGSESHSINFFGSEGEVVFKVYLGRDKQRALFPEQVRQFKALATAFASV
Sequences:
>Translated_209_residues MPSHSIVTTAGDSKMKMTLDSELDVAPDLGSEQRQLSEQNQPSEQQAQLRQRFEQQADLMPAQLASELGIAELEVVAALP PEQVVFVPLTQLDTLLQALPEWGKLTTIVMLSGSVFEFKGDFPDGKYAHGYYNLYSKGDGLHGHLKLEAMRGIALISRPF RGSESHSINFFGSEGEVVFKVYLGRDKQRALFPEQVRQFKALATAFASV >Mature_208_residues PSHSIVTTAGDSKMKMTLDSELDVAPDLGSEQRQLSEQNQPSEQQAQLRQRFEQQADLMPAQLASELGIAELEVVAALPP EQVVFVPLTQLDTLLQALPEWGKLTTIVMLSGSVFEFKGDFPDGKYAHGYYNLYSKGDGLHGHLKLEAMRGIALISRPFR GSESHSINFFGSEGEVVFKVYLGRDKQRALFPEQVRQFKALATAFASV
Specific function: Unknown
COG id: COG3721
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23130; Mature: 22998
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHSIVTTAGDSKMKMTLDSELDVAPDLGSEQRQLSEQNQPSEQQAQLRQRFEQQADLM CCCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC PAQLASELGIAELEVVAALPPEQVVFVPLTQLDTLLQALPEWGKLTTIVMLSGSVFEFKG HHHHHHHCCHHHEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEC DFPDGKYAHGYYNLYSKGDGLHGHLKLEAMRGIALISRPFRGSESHSINFFGSEGEVVFK CCCCCCEECCEEEEECCCCCCEEEEEEHHHHCHHHHCCCCCCCCCCEEEEECCCCCEEEE VYLGRDKQRALFPEQVRQFKALATAFASV EEECCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSHSIVTTAGDSKMKMTLDSELDVAPDLGSEQRQLSEQNQPSEQQAQLRQRFEQQADLM CCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC PAQLASELGIAELEVVAALPPEQVVFVPLTQLDTLLQALPEWGKLTTIVMLSGSVFEFKG HHHHHHHCCHHHEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEC DFPDGKYAHGYYNLYSKGDGLHGHLKLEAMRGIALISRPFRGSESHSINFFGSEGEVVFK CCCCCCEECCEEEEECCCCCCEEEEEEHHHHCHHHHCCCCCCCCCCEEEEECCCCCEEEE VYLGRDKQRALFPEQVRQFKALATAFASV EEECCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA