| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126172913
Identifier: 126172913
GI number: 126172913
Start: 754518
End: 755246
Strand: Direct
Name: 126172913
Synonym: Sbal_0664
Alternate gene names: NA
Gene position: 754518-755246 (Clockwise)
Preceding gene: 126172912
Following gene: 126172916
Centisome position: 14.72
GC content: 45.27
Gene sequence:
>729_bases ATGACTGATCTTGAGCAACAGGTTTTTACTCAAATTAGAGCTATCATAGCGAACGAAGAGCAAGTGATTGGCCGCAGAGG GATTTTAATTCCACTCAAAAAAGCGATCCTTGCTGAAGGCGACATTCGTAACGTGATCGACATTATCTCGAGCGATCCCG CATTAGCGGCGCACATGTTAATGCGCAGTAATTCCGCACAAGCATCTGGGGTGATTAACCCTAAGACTCGCTCGTTGAAA GAAGCTTTGGTCCGCTTAGGTCAAGTGAATATCTATCGCTATGCCTTTACGTTTTATCTGCAAGAACGCCTCGATGAGCT GCCGCAGCCCTATAAAAAGTTAGTCCAAGGTTATTGGAAATTGACCGAAGATATTGCAACTGATGCGGTGGACAGTTTAG CGGAGATGGAAGGCGTCGAGGTTGATGCTGATGAGGTGCAAACCTTGGCCCTGTTCAGTGTGTTCGGCCAAATTATCGCG CTCACGGCATTTGCCTATTTAAATGCTAATGCCGAACAATCATTCCCTTTAAGCGTGATTAAGTCATTGATTGATAATCA ACAGCAGACTTTGACCATAGAATCATTCGAAGCGTTAGATTTAGATCAGGATTTACGCCAAGAGTTTATGATTGCCCATA ATTTGCGTCAGACCCGCAATTCGAATTCCCCCGGTTTAATCCTGCGCCGCGTATTGTCTATGCGTGGTCTGTTGATGAAT CCGCTGTAA
Upstream 100 bases:
>100_bases TTTTACTTTGCTGTTTATGGCTGAAATTCTTAGTATTTTAGGTATGATGTGAGCTGTAACCGAATCATCTTATTGTTAAT AAACAGGTGTAAAGTGTCTT
Downstream 100 bases:
>100_bases TTTTGAGATTCGCTAAATAGCTGTTTGATCCTATGAAATAGCCATTTTATTCATTAAAAAAGCCTGCATTCGCATAATGC CGTTCACTTAAGAGTGAACG
Product: putative signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTDLEQQVFTQIRAIIANEEQVIGRRGILIPLKKAILAEGDIRNVIDIISSDPALAAHMLMRSNSAQASGVINPKTRSLK EALVRLGQVNIYRYAFTFYLQERLDELPQPYKKLVQGYWKLTEDIATDAVDSLAEMEGVEVDADEVQTLALFSVFGQIIA LTAFAYLNANAEQSFPLSVIKSLIDNQQQTLTIESFEALDLDQDLRQEFMIAHNLRQTRNSNSPGLILRRVLSMRGLLMN PL
Sequences:
>Translated_242_residues MTDLEQQVFTQIRAIIANEEQVIGRRGILIPLKKAILAEGDIRNVIDIISSDPALAAHMLMRSNSAQASGVINPKTRSLK EALVRLGQVNIYRYAFTFYLQERLDELPQPYKKLVQGYWKLTEDIATDAVDSLAEMEGVEVDADEVQTLALFSVFGQIIA LTAFAYLNANAEQSFPLSVIKSLIDNQQQTLTIESFEALDLDQDLRQEFMIAHNLRQTRNSNSPGLILRRVLSMRGLLMN PL >Mature_241_residues TDLEQQVFTQIRAIIANEEQVIGRRGILIPLKKAILAEGDIRNVIDIISSDPALAAHMLMRSNSAQASGVINPKTRSLKE ALVRLGQVNIYRYAFTFYLQERLDELPQPYKKLVQGYWKLTEDIATDAVDSLAEMEGVEVDADEVQTLALFSVFGQIIAL TAFAYLNANAEQSFPLSVIKSLIDNQQQTLTIESFEALDLDQDLRQEFMIAHNLRQTRNSNSPGLILRRVLSMRGLLMNP L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27208; Mature: 27077
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLEQQVFTQIRAIIANEEQVIGRRGILIPLKKAILAEGDIRNVIDIISSDPALAAHML CCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH MRSNSAQASGVINPKTRSLKEALVRLGQVNIYRYAFTFYLQERLDELPQPYKKLVQGYWK HHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LTEDIATDAVDSLAEMEGVEVDADEVQTLALFSVFGQIIALTAFAYLNANAEQSFPLSVI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH KSLIDNQQQTLTIESFEALDLDQDLRQEFMIAHNLRQTRNSNSPGLILRRVLSMRGLLMN HHHHCCHHHEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC PL CC >Mature Secondary Structure TDLEQQVFTQIRAIIANEEQVIGRRGILIPLKKAILAEGDIRNVIDIISSDPALAAHML CCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH MRSNSAQASGVINPKTRSLKEALVRLGQVNIYRYAFTFYLQERLDELPQPYKKLVQGYWK HHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LTEDIATDAVDSLAEMEGVEVDADEVQTLALFSVFGQIIALTAFAYLNANAEQSFPLSVI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH KSLIDNQQQTLTIESFEALDLDQDLRQEFMIAHNLRQTRNSNSPGLILRRVLSMRGLLMN HHHHCCHHHEEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC PL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA