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The map label for this gene is yddH [H]

Identifier: 126172875

GI number: 126172875

Start: 711304

End: 711900

Strand: Direct

Name: yddH [H]

Synonym: Sbal_0626

Alternate gene names: 126172875

Gene position: 711304-711900 (Clockwise)

Preceding gene: 126172874

Following gene: 126172876

Centisome position: 13.87

GC content: 48.58

Gene sequence:

>597_bases
ATGCATCACCAAAGGAAAACTCACGTGGATAACAATATAGCGGCCGTTGAATTAGCCAAAGCGTACCGATTACTCAATCA
TGGTCCAACCGTTTTAGTGTCGGCTCGTAGTCAGGGGATCGACAACGTTATGGCTGCTGCTTGGTGCTGTGCGCTTGATT
TCGCGCCACCTAAATTAACGGTCGTGCTAGACAAGATGACTAAAACCCGTGAGTTCATCGAGCAAAGTGGCATGTTTGTC
ATCCAAGTTCCAACCGTTGCTCAGTTGCAGTTAACCCATCGAGTTGGCAGCCAAAGCTTAGCCGATGATGCTAATAAGCT
GCTCAATTGCGGTGTTGAACTGTTTGAGATGGCGGGCCACGACTTGCCTTTTGTGGCGGGTTGTTCCGCTTGGCTGGCAT
GTAAGCTCATCCCTGAACCTAATAATCAGCTCCAATATGATCTGTTTATTGCCGAAGTCATTGGCGCTTGGGCTGACACC
CAAGTGTTTAATCATGGCCATTGGCATTTTGACACTGCGCCAGCGGATAAGCGCAGCTTGCATTACATTGCGGGAGGTCA
GTTTTATGCCATTGGCGAGTCATTCAATGCAGACTAA

Upstream 100 bases:

>100_bases
CAATGCCAAAGCCATACAAGCATTGATTATTGCTGGTCATGATAATTTGCAGCGTTTTCTACGCTAGCTTTCATCAACAA
ATTGGATAGGAATACACATC

Downstream 100 bases:

>100_bases
TTAATCGACGTCCACTTAAAAGATTATCAGCACCTTGAGTTTGTCACTCACACATTTGCTCATTGAAGATTGATGAGATG
TTCAGCCGCAACGGACGCAT

Product: flavin reductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MHHQRKTHVDNNIAAVELAKAYRLLNHGPTVLVSARSQGIDNVMAAAWCCALDFAPPKLTVVLDKMTKTREFIEQSGMFV
IQVPTVAQLQLTHRVGSQSLADDANKLLNCGVELFEMAGHDLPFVAGCSAWLACKLIPEPNNQLQYDLFIAEVIGAWADT
QVFNHGHWHFDTAPADKRSLHYIAGGQFYAIGESFNAD

Sequences:

>Translated_198_residues
MHHQRKTHVDNNIAAVELAKAYRLLNHGPTVLVSARSQGIDNVMAAAWCCALDFAPPKLTVVLDKMTKTREFIEQSGMFV
IQVPTVAQLQLTHRVGSQSLADDANKLLNCGVELFEMAGHDLPFVAGCSAWLACKLIPEPNNQLQYDLFIAEVIGAWADT
QVFNHGHWHFDTAPADKRSLHYIAGGQFYAIGESFNAD
>Mature_198_residues
MHHQRKTHVDNNIAAVELAKAYRLLNHGPTVLVSARSQGIDNVMAAAWCCALDFAPPKLTVVLDKMTKTREFIEQSGMFV
IQVPTVAQLQLTHRVGSQSLADDANKLLNCGVELFEMAGHDLPFVAGCSAWLACKLIPEPNNQLQYDLFIAEVIGAWADT
QVFNHGHWHFDTAPADKRSLHYIAGGQFYAIGESFNAD

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=188, Percent_Identity=42.0212765957447, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21858; Mature: 21858

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHQRKTHVDNNIAAVELAKAYRLLNHGPTVLVSARSQGIDNVMAAAWCCALDFAPPKLT
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEE
VVLDKMTKTREFIEQSGMFVIQVPTVAQLQLTHRVGSQSLADDANKLLNCGVELFEMAGH
EEEHHHHHHHHHHHHCCCEEEECCCHHEEHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCC
DLPFVAGCSAWLACKLIPEPNNQLQYDLFIAEVIGAWADTQVFNHGHWHFDTAPADKRSL
CCCHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHCCHHCCHHCCCCCEEECCCCCCCCCE
HYIAGGQFYAIGESFNAD
EEEECCEEEEECCCCCCC
>Mature Secondary Structure
MHHQRKTHVDNNIAAVELAKAYRLLNHGPTVLVSARSQGIDNVMAAAWCCALDFAPPKLT
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEE
VVLDKMTKTREFIEQSGMFVIQVPTVAQLQLTHRVGSQSLADDANKLLNCGVELFEMAGH
EEEHHHHHHHHHHHHCCCEEEECCCHHEEHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCC
DLPFVAGCSAWLACKLIPEPNNQLQYDLFIAEVIGAWADTQVFNHGHWHFDTAPADKRSL
CCCHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHCCHHCCHHCCCCCEEECCCCCCCCCE
HYIAGGQFYAIGESFNAD
EEEECCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]