| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is mlhB [H]
Identifier: 126172819
GI number: 126172819
Start: 644402
End: 645313
Strand: Direct
Name: mlhB [H]
Synonym: Sbal_0570
Alternate gene names: 126172819
Gene position: 644402-645313 (Clockwise)
Preceding gene: 126172818
Following gene: 126172820
Centisome position: 12.57
GC content: 49.23
Gene sequence:
>912_bases ATGCCAAGCTGGCAAGCATCTGTACTGAATACTATTTTATCTTATGTCGCTAGGCCATCCATCAGTCGCGGCAAGGCCAA AGTCCCTCTAGCGCAAGTGCGTAAAAAGTTGCTTGATCTCGATAAACGTTGGCTTCCTTGGCCGGATAAGTTAGTTAGTG CCACCATCCCTTTGCAACACTCTAGCTTGCTGCACTATGTGCTTCTCAATCAACAAACTCGCCTTGGCAATCTGTTTTAT ATCCGAGGCGGAGGTTTTTGTTTTAAAACGCCCCATGCCCACGCAAGATTGATCGCGGATATCAGCCAGCGTTGTAAATT GGATGCCTATATTCCTGATTATCGTCTCGCACCTGAGCATCCTTTTCCTGCGCCATTTGATGATGTGCTTGAAGCCTATA AGCGATTAATCGCGCTTAAGGGCGCTGAGAATGTGATTCTCATGGGCGACTCTGCTGGCGGCAATTTAGCCCTGAGTTTG TTGCTGGAATTAAAGCGTTTAGCCCTGCCTTTGCCGACGGCTTGTATCTTGTTATCGCCCGCGTTGGATTTAGCACTAAC GGGGGATACTGAGTTGATACTCGCGGCTGACGATCCCTTCTTCACCATCGAAGCTTTGCTGCGTTTACGTGGCGCTTATC TTGCGGGTGCCGACCCCATGTCAGCAAAAGTTTCACCCTTGCAGGGGGACTTGGCAGATCTGCCGCCCATCTTAGTGATT GCGGGTACGCGGGAGCTGTTATTGCAGGATTCTGAGCGCCTAGTCGCTCAAGTCAAAGCTAGCGGTGGCGAGATAACGGG CTGTTTTTACCCTAACATGCCCCATGTGTTTCCCTTGTTCAATTTATTGCCCGAAGCCCTTGAAGTGAGGTCGAAAATTA GCCATTTTGTGCTTTCACACTTGATTCGTTAA
Upstream 100 bases:
>100_bases CTGCGCTTAAAAGCACAGAATTATAGGAAGTTAGATCTGCTGTAGTCCACGACCTGCGACTTGAGCGTCGGGATGGCGGC GTTTAAGTAGAGGAAGGGAT
Downstream 100 bases:
>100_bases AATGGTGTAGTTATTCACATTCAGTGAATAGCTAGCAAAATGAGGGGTAAATAACTTTTTTTATGACTAATTATGCTGAA AGCCACGGGCATAACCGCTT
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQHSSLLHYVLLNQQTRLGNLFY IRGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEHPFPAPFDDVLEAYKRLIALKGAENVILMGDSAGGNLALSL LLELKRLALPLPTACILLSPALDLALTGDTELILAADDPFFTIEALLRLRGAYLAGADPMSAKVSPLQGDLADLPPILVI AGTRELLLQDSERLVAQVKASGGEITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSHLIR
Sequences:
>Translated_303_residues MPSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQHSSLLHYVLLNQQTRLGNLFY IRGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEHPFPAPFDDVLEAYKRLIALKGAENVILMGDSAGGNLALSL LLELKRLALPLPTACILLSPALDLALTGDTELILAADDPFFTIEALLRLRGAYLAGADPMSAKVSPLQGDLADLPPILVI AGTRELLLQDSERLVAQVKASGGEITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSHLIR >Mature_302_residues PSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQHSSLLHYVLLNQQTRLGNLFYI RGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEHPFPAPFDDVLEAYKRLIALKGAENVILMGDSAGGNLALSLL LELKRLALPLPTACILLSPALDLALTGDTELILAADDPFFTIEALLRLRGAYLAGADPMSAKVSPLQGDLADLPPILVIA GTRELLLQDSERLVAQVKASGGEITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSHLIR
Specific function: Lactone hydrolase that is required for the degradation of monocyclic monoterpenes such as menthol and carvone. Catalyzes the ring opening of lactones formed during degradation of monocyclic monoterpenes. Can hydrolyze epsilon-caprolactone, the lactone der
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17567059, Length=141, Percent_Identity=31.2056737588652, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.83 [H]
Molecular weight: Translated: 33303; Mature: 33171
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQH CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEECCCCH SSLLHYVLLNQQTRLGNLFYIRGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEH HHHHHHHHHCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHCEECCCCCCCCCCCCC PFPAPFDDVLEAYKRLIALKGAENVILMGDSAGGNLALSLLLELKRLALPLPTACILLSP CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC ALDLALTGDTELILAADDPFFTIEALLRLRGAYLAGADPMSAKVSPLQGDLADLPPILVI CCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCEEEE AGTRELLLQDSERLVAQVKASGGEITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSH ECCHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HCC >Mature Secondary Structure PSWQASVLNTILSYVARPSISRGKAKVPLAQVRKKLLDLDKRWLPWPDKLVSATIPLQH CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEECCCCH SSLLHYVLLNQQTRLGNLFYIRGGGFCFKTPHAHARLIADISQRCKLDAYIPDYRLAPEH HHHHHHHHHCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHCEECCCCCCCCCCCCC PFPAPFDDVLEAYKRLIALKGAENVILMGDSAGGNLALSLLLELKRLALPLPTACILLSP CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC ALDLALTGDTELILAADDPFFTIEALLRLRGAYLAGADPMSAKVSPLQGDLADLPPILVI CCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCEEEE AGTRELLLQDSERLVAQVKASGGEITGCFYPNMPHVFPLFNLLPEALEVRSKISHFVLSH ECCHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA