| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126172818
Identifier: 126172818
GI number: 126172818
Start: 643201
End: 644346
Strand: Direct
Name: 126172818
Synonym: Sbal_0569
Alternate gene names: NA
Gene position: 643201-644346 (Clockwise)
Preceding gene: 126172817
Following gene: 126172819
Centisome position: 12.54
GC content: 46.77
Gene sequence:
>1146_bases GTGGCGATTTCGGTTGCGGGCGGTGTAAGACCTGGCAAAATTATAGAGATAGAGCACAGACTCTATCAGCAATTGATCCT CGGAAAGCATAAAGCGAGCCCGACTCTTTTGGATGACCTCGACCTTGAATTAGAGGCCGATGCGAATAAGTTAGATGTTG AGCGCGAAGCGATTTTAGCGCGTTTGATGAAACAAATTAAAGCCAAAGAAGTGTTTGAAGCCGTGTCGAGCCAGTTGCAT GAAACGGTCAATAACGCCATCGAGCATCAACTCGCGTCCCCCGAACTGGTTCTGGCTAAGTCAGAGATCAATGAATCGCA AATTCTGTTGCTGGAATTACTGCTGGCAAAAAATCTTGATGCGACGAGATTAAGACCGCTGATCAGTAACTTAAGTTGGT TGTGCCGCGACTTAACCAACATGGTCAACAGCCCGTCTTTTCGTGCTCGCCGGCCTCAGAGCTCAGATGTGCGAGTTACC GATATTAAATTGGTGATGAATTACATTGGCATCGAAAACCTGCGAACGATTATCCCTTATTTTTGCCTGCGTAATTGGCT GCCGAGCGCCAATGCTAAGTTGCTGTGGACTACCCGTAAATTGTGGCGCTACAGCATAGTCAGTGGTATCGCGGCCAATG CGTTGGCTCAGCTTCATAATACTGACTCAGCCTTAGTTTATAGTAGTGCCTTGCTCAATCAATTAGGCACCTCGGTTGTG CTGAGTTTGAGTGCCCGCTTATTTGATCAAACCTGGGGAGCGTGGATAAGGGAAGCCAGCAGCAGCCGTGACAAGGAAGT GTATGATGCGGTGATTGCCACTGAGTTTCCTGCCAAAGCTGTGTTTGAACAAGTGTTAAGCCATGGTCATAAACTTAACT GGCAGCTATTAGAGTTACTTAAGTTTGAAGCGAGCCCTTTGACTGGGTTATTGAAGGAGTTAGACCTGACCTTAAGCTAT CGAGAATTGTCACCGCAGGCCGCATTAGTCGCGCGGGCAAACTGTTATGCTAAGGTGGTGTTGCTCGAAGAAATGCGTCA AATCGATCCCCAAGAAAAGCGTTTAATGTTCGATTATTACGAGTTAACTGAGCAAGAAGTGCTGCGCTTAAAAGCACAGA ATTATAGGAAGTTAGATCTGCTGTAG
Upstream 100 bases:
>100_bases TTATTGCTAAGATTAAGTGTATGTGCTGAAATTGTAATGATTTTGAGAGTTTGATTGTTTTGACGTCACTCGGGCATTAG CGATATAGGAAAGATTTATA
Downstream 100 bases:
>100_bases TCCACGACCTGCGACTTGAGCGTCGGGATGGCGGCGTTTAAGTAGAGGAAGGGATATGCCAAGCTGGCAAGCATCTGTAC TGAATACTATTTTATCTTAT
Product: putative signal transduction protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase HDOD; HD Superfamily Hydrolase
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLH ETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVT DIKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSY RELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL
Sequences:
>Translated_381_residues MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLH ETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVT DIKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSY RELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL >Mature_380_residues AISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLHE TVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTD IKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVVL SLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSYR ELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43257; Mature: 43125
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILA CEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH RLMKQIKAKEVFEAVSSQLHETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHCCCC ATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTDIKLVMNYIGIENLRTIIPY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH KFEASPLTGLLKELDLTLSYRELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYY HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ELTEQEVLRLKAQNYRKLDLL HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILA EEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH RLMKQIKAKEVFEAVSSQLHETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHCCCC ATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTDIKLVMNYIGIENLRTIIPY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH KFEASPLTGLLKELDLTLSYRELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYY HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ELTEQEVLRLKAQNYRKLDLL HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA