Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is 126172818

Identifier: 126172818

GI number: 126172818

Start: 643201

End: 644346

Strand: Direct

Name: 126172818

Synonym: Sbal_0569

Alternate gene names: NA

Gene position: 643201-644346 (Clockwise)

Preceding gene: 126172817

Following gene: 126172819

Centisome position: 12.54

GC content: 46.77

Gene sequence:

>1146_bases
GTGGCGATTTCGGTTGCGGGCGGTGTAAGACCTGGCAAAATTATAGAGATAGAGCACAGACTCTATCAGCAATTGATCCT
CGGAAAGCATAAAGCGAGCCCGACTCTTTTGGATGACCTCGACCTTGAATTAGAGGCCGATGCGAATAAGTTAGATGTTG
AGCGCGAAGCGATTTTAGCGCGTTTGATGAAACAAATTAAAGCCAAAGAAGTGTTTGAAGCCGTGTCGAGCCAGTTGCAT
GAAACGGTCAATAACGCCATCGAGCATCAACTCGCGTCCCCCGAACTGGTTCTGGCTAAGTCAGAGATCAATGAATCGCA
AATTCTGTTGCTGGAATTACTGCTGGCAAAAAATCTTGATGCGACGAGATTAAGACCGCTGATCAGTAACTTAAGTTGGT
TGTGCCGCGACTTAACCAACATGGTCAACAGCCCGTCTTTTCGTGCTCGCCGGCCTCAGAGCTCAGATGTGCGAGTTACC
GATATTAAATTGGTGATGAATTACATTGGCATCGAAAACCTGCGAACGATTATCCCTTATTTTTGCCTGCGTAATTGGCT
GCCGAGCGCCAATGCTAAGTTGCTGTGGACTACCCGTAAATTGTGGCGCTACAGCATAGTCAGTGGTATCGCGGCCAATG
CGTTGGCTCAGCTTCATAATACTGACTCAGCCTTAGTTTATAGTAGTGCCTTGCTCAATCAATTAGGCACCTCGGTTGTG
CTGAGTTTGAGTGCCCGCTTATTTGATCAAACCTGGGGAGCGTGGATAAGGGAAGCCAGCAGCAGCCGTGACAAGGAAGT
GTATGATGCGGTGATTGCCACTGAGTTTCCTGCCAAAGCTGTGTTTGAACAAGTGTTAAGCCATGGTCATAAACTTAACT
GGCAGCTATTAGAGTTACTTAAGTTTGAAGCGAGCCCTTTGACTGGGTTATTGAAGGAGTTAGACCTGACCTTAAGCTAT
CGAGAATTGTCACCGCAGGCCGCATTAGTCGCGCGGGCAAACTGTTATGCTAAGGTGGTGTTGCTCGAAGAAATGCGTCA
AATCGATCCCCAAGAAAAGCGTTTAATGTTCGATTATTACGAGTTAACTGAGCAAGAAGTGCTGCGCTTAAAAGCACAGA
ATTATAGGAAGTTAGATCTGCTGTAG

Upstream 100 bases:

>100_bases
TTATTGCTAAGATTAAGTGTATGTGCTGAAATTGTAATGATTTTGAGAGTTTGATTGTTTTGACGTCACTCGGGCATTAG
CGATATAGGAAAGATTTATA

Downstream 100 bases:

>100_bases
TCCACGACCTGCGACTTGAGCGTCGGGATGGCGGCGTTTAAGTAGAGGAAGGGATATGCCAAGCTGGCAAGCATCTGTAC
TGAATACTATTTTATCTTAT

Product: putative signal transduction protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase HDOD; HD Superfamily Hydrolase

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLH
ETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVT
DIKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV
LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSY
RELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL

Sequences:

>Translated_381_residues
MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLH
ETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVT
DIKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV
LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSY
RELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL
>Mature_380_residues
AISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILARLMKQIKAKEVFEAVSSQLHE
TVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLDATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTD
IKLVMNYIGIENLRTIIPYFCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVVL
SLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELLKFEASPLTGLLKELDLTLSYR
ELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYYELTEQEVLRLKAQNYRKLDLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43257; Mature: 43125

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILA
CEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH
RLMKQIKAKEVFEAVSSQLHETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHCCCC
ATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTDIKLVMNYIGIENLRTIIPY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV
HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH
KFEASPLTGLLKELDLTLSYRELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYY
HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ELTEQEVLRLKAQNYRKLDLL
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AISVAGGVRPGKIIEIEHRLYQQLILGKHKASPTLLDDLDLELEADANKLDVEREAILA
EEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH
RLMKQIKAKEVFEAVSSQLHETVNNAIEHQLASPELVLAKSEINESQILLLELLLAKNLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHHHHHHHHHCCCC
ATRLRPLISNLSWLCRDLTNMVNSPSFRARRPQSSDVRVTDIKLVMNYIGIENLRTIIPY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FCLRNWLPSANAKLLWTTRKLWRYSIVSGIAANALAQLHNTDSALVYSSALLNQLGTSVV
HHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LSLSARLFDQTWGAWIREASSSRDKEVYDAVIATEFPAKAVFEQVLSHGHKLNWQLLELL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH
KFEASPLTGLLKELDLTLSYRELSPQAALVARANCYAKVVLLEEMRQIDPQEKRLMFDYY
HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ELTEQEVLRLKAQNYRKLDLL
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA