Click here to switch to the map view.

The map label for this gene is glnR [H]

Identifier: 125625241

GI number: 125625241

Start: 2440807

End: 2441172

Strand: Reverse

Name: glnR [H]

Synonym: llmg_2485

Alternate gene names: 125625241

Gene position: 2441172-2440807 (Counterclockwise)

Preceding gene: 125625242

Following gene: 125625240

Centisome position: 96.51

GC content: 42.62

Gene sequence:

>366_bases
GTGAAAGAACGTGAATTAAGACGCTCTATGGCGGTACTTCCAATAGGAACTGTCATGAAACTCACTGACTTAAGCGCAAG
GCAGATTCGTTACTACGAAGAGCAAGAGCTTATTTTCCCAGAGCGAAGTGACGGTAATCGTCGAATGTATTCGCTCAATG
ACATAGATGCCCTTTTTGATATTGCTGATTTACTGCAAGAAGGCAATAATATTGCGGATATCAAGGAAATTTATGCAAAA
AGGGATGCTAAAAAAGCTCAAACTTTATCTATCGGAGAAGTCCACCATGCACTTGAACGCGAATTTGCCCAGCAAGGGAG
ATTCGGGACTCCTAATCCCACTCATTTTACCCAACCGCGGATGTAA

Upstream 100 bases:

>100_bases
TAAATTTCAAATAAAAAGAACTGATGTGAGAAAATCTCACATTGAAGCTTGACTTTGCGAAAGACAAGGTCTATAATGAT
ACGTATGGAGGCGAGATTTG

Downstream 100 bases:

>100_bases
ATTTGGTTGACATAATTTGTCAAGCAAGTTTACAGTGAAAATTTAACTAGGAGAGTAAAGCATGACAATCACAGCAGCAG
ACATTCGTCGCGACGTCAAA

Product: glutamine synthetase repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFDIADLLQEGNNIADIKEIYAK
RDAKKAQTLSIGEVHHALEREFAQQGRFGTPNPTHFTQPRM

Sequences:

>Translated_121_residues
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFDIADLLQEGNNIADIKEIYAK
RDAKKAQTLSIGEVHHALEREFAQQGRFGTPNPTHFTQPRM
>Mature_121_residues
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFDIADLLQEGNNIADIKEIYAK
RDAKKAQTLSIGEVHHALEREFAQQGRFGTPNPTHFTQPRM

Specific function: Represses many genes including the glnRA operon and tnrA during growth with nitrogen excess [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 14067; Mature: 14067

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFD
CCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHH
IADLLQEGNNIADIKEIYAKRDAKKAQTLSIGEVHHALEREFAQQGRFGTPNPTHFTQPR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
M
C
>Mature Secondary Structure
MKERELRRSMAVLPIGTVMKLTDLSARQIRYYEEQELIFPERSDGNRRMYSLNDIDALFD
CCHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHH
IADLLQEGNNIADIKEIYAKRDAKKAQTLSIGEVHHALEREFAQQGRFGTPNPTHFTQPR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2906311; 2573733; 1677938; 9384377 [H]