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The map label for this gene is secY [H]

Identifier: 125625121

GI number: 125625121

Start: 2314596

End: 2315915

Strand: Reverse

Name: secY [H]

Synonym: llmg_2361

Alternate gene names: 125625121

Gene position: 2315915-2314596 (Counterclockwise)

Preceding gene: 125625122

Following gene: 125625120

Centisome position: 91.56

GC content: 38.18

Gene sequence:

>1320_bases
ATGTTTTTTAAGACGCTTAAGGAAGCCTTCAAGGTAAAAGACGTCCGAGCAAGAATTCTCTTTACGATCTTCATTCTTTT
TGTTTTTCGCCTAGGTGCTCACATTACTGCACCTGGCGTTAATGTACAAAATCTACAACAAGTTGCGGATTTGCCATTTT
TAAGCATGATGAACTTGGTTTCTGGTAATGCAATGCAAAACTACTCACTCTTTGCAATGGGAGTTTCGCCTTATATCACT
GCCTCAATCATTGTGCAATTATTACAAATGGATATTTTACCAAAATTTGTTGAGTGGTCAAAACAAGGAGAAATTGGACG
TCGTAAGCTGAATCAGGCGACACGTTATATTACCTTAGTGCTTGCTATGGCACAATCTATCGGGATTACTGCTGGTTTCC
AAGCCATGAGCTCGTTAAATATTGTGCAAAACCCAAATTGGCAAAGTTATTTGATGATTGGGGTGCTTTTGACCACAGGT
TCAATGGTTGTTACTTGGATGGGTGAACAGATTAATGAAAAAGGTTTTGGATCAGGTGTTTCAGTAATTATCTTTGCTGG
GATTGTCTCTGGTATTCCATCAGCCATCAAATCTGTTTATGATGAAAAATTCTTAAACGTAAGACCATCTGAAATTCCTA
TGTCTTGGATATTTGTTATTGGATTGATTTTGTCAGCAATTGTCATTATTTATGTTACAACATTTGTTCAACAAGCGGAA
CGTAAAGTACCAATTCAATACACTAAGTTGACTCAAGGCGCACCAACAAGTTCGTACTTACCACTTCGTGTCAATCCAGC
TGGTGTTATTCCAGTTATCTTTGCTGGTTCAATTACAACTGCACCTGCTACGATCTTGCAATTCTTGCAACGTTCACAAG
GTAGCAATGTAGGTTGGTTATCAACCTTACAAAATGCTTTGTCATATACGACTTGGACAGGGATGCTCTTCTACGCATTA
TTGATTGTTCTCTTTACTTTCTTCTATTCGTTCGTTCAGGTCAATCCTGAAAAGATGGCTGAAAACCTTCAAAAACAAGG
TTCGTATATTCCATCTGTTCGTCCGGGTAAAGGAACTGAGAAGTATGTTTCTCGTCTATTAATGCGTCTTGCAACGGTTG
GTTCGCTCTTCCTTGGATTGATTTCAATCATTCCAATTGCGGCCCAAAACGTTTGGGGACTTCCAAAAATCGTCGCTCTT
GGAGGGACATCATTATTAATCTTGATTCAAGTTGCGATTCAAGCAGTTAAACAACTTGAAGGATATTTACTTAAACGTAA
ATATGCAGGATTTATGGATAATCCACTTGAAACAAAATAA

Upstream 100 bases:

>100_bases
GTGGTTCTGTAGAAGAAGCTTAATTTTTACATTTCAATTGGCGGTTGAATCTTCAACCGCTTATTGTCTATTTACAATTA
AAACGCTTTAAGGAGATTTT

Downstream 100 bases:

>100_bases
AATCTTGTCATTAGACAAGGTTTTTCTTTATTTTTCAGTAAAAATACGCTAAAATAGTGTAGGTAAAAGACAGTGTACAT
CTGCATTTTACTGACAGAGC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MFFKTLKEAFKVKDVRARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGNAMQNYSLFAMGVSPYIT
ASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTG
SMVVTWMGEQINEKGFGSGVSVIIFAGIVSGIPSAIKSVYDEKFLNVRPSEIPMSWIFVIGLILSAIVIIYVTTFVQQAE
RKVPIQYTKLTQGAPTSSYLPLRVNPAGVIPVIFAGSITTAPATILQFLQRSQGSNVGWLSTLQNALSYTTWTGMLFYAL
LIVLFTFFYSFVQVNPEKMAENLQKQGSYIPSVRPGKGTEKYVSRLLMRLATVGSLFLGLISIIPIAAQNVWGLPKIVAL
GGTSLLILIQVAIQAVKQLEGYLLKRKYAGFMDNPLETK

Sequences:

>Translated_439_residues
MFFKTLKEAFKVKDVRARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGNAMQNYSLFAMGVSPYIT
ASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTG
SMVVTWMGEQINEKGFGSGVSVIIFAGIVSGIPSAIKSVYDEKFLNVRPSEIPMSWIFVIGLILSAIVIIYVTTFVQQAE
RKVPIQYTKLTQGAPTSSYLPLRVNPAGVIPVIFAGSITTAPATILQFLQRSQGSNVGWLSTLQNALSYTTWTGMLFYAL
LIVLFTFFYSFVQVNPEKMAENLQKQGSYIPSVRPGKGTEKYVSRLLMRLATVGSLFLGLISIIPIAAQNVWGLPKIVAL
GGTSLLILIQVAIQAVKQLEGYLLKRKYAGFMDNPLETK
>Mature_439_residues
MFFKTLKEAFKVKDVRARILFTIFILFVFRLGAHITAPGVNVQNLQQVADLPFLSMMNLVSGNAMQNYSLFAMGVSPYIT
ASIIVQLLQMDILPKFVEWSKQGEIGRRKLNQATRYITLVLAMAQSIGITAGFQAMSSLNIVQNPNWQSYLMIGVLLTTG
SMVVTWMGEQINEKGFGSGVSVIIFAGIVSGIPSAIKSVYDEKFLNVRPSEIPMSWIFVIGLILSAIVIIYVTTFVQQAE
RKVPIQYTKLTQGAPTSSYLPLRVNPAGVIPVIFAGSITTAPATILQFLQRSQGSNVGWLSTLQNALSYTTWTGMLFYAL
LIVLFTFFYSFVQVNPEKMAENLQKQGSYIPSVRPGKGTEKYVSRLLMRLATVGSLFLGLISIIPIAAQNVWGLPKIVAL
GGTSLLILIQVAIQAVKQLEGYLLKRKYAGFMDNPLETK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=38.2978723404255, Blast_Score=255, Evalue=4e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48439; Mature: 48439

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]