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The map label for this gene is ymfF [H]

Identifier: 125624994

GI number: 125624994

Start: 2189428

End: 2190714

Strand: Reverse

Name: ymfF [H]

Synonym: llmg_2227

Alternate gene names: 125624994

Gene position: 2190714-2189428 (Counterclockwise)

Preceding gene: 125624997

Following gene: 125624993

Centisome position: 86.61

GC content: 35.28

Gene sequence:

>1287_bases
TTGACAGAAATAAAAATGGCAGATGGAGTTATGCTCCATGTGATTAAAGAAACGAAATTTAAAACAGTAAGGCTGATGGT
TCGTTTTCGAGAAGAATTATCAGCTGATAGACTCGGAAAACGGGTCCTCCTATCTAATATGCTTGAAAGCACAAATGCTG
TCTATCAAACAGGAAAAGATTTTAGCCGTAAACTCTCAGAGATGTTTGGCGCCTCATTTACGACAGGGGTTGCCAAAAAA
GGAAAGCAACATTTACTTTCACTTAACATGAGTTTTGTAAATCCAAGATTAGTAGATTTTGATACCTTAGGAGCAGCAGT
TGATTTTTTGAAAATTGCTATTTTTCAACCTGATGCAAGTCAAGGGCAATTTAATCCTGAAATTTTCAAAAGAGAGCAAA
GAAATTTATTGCATTACCTAGCTTCAATGAATGATGATCGGGCTTATTATGCCAGTCGTCAATTGGCTAATTTGTTTTTT
GAAAATGTCAATCAGGCTCTGCCAAGTGTTGGAACAAGTGAGCTAATCGCCAAAGAAAATCCTCAAGACCTTTTTGAGTA
CTATCAAAAAATGTTAGCTGAGAATGCGATTGATATTTTTGTCTTGGGTGATGTGGATGAAAAACGAGTGATTGACTTAT
TTTCAGACTTTAATTTTACTGACAGAGCGGTCAGTAAAGAAATTTTTTATCAACAATCACTGACAGAATTGTCAGTTCTG
ACCGAGGAAAAAGAGGTTGCGCAGTCCATTTTGCAGCTAGCTTACCAAATGCCAGTGGCTTACGGAGATGAGAATTATCT
TGCGCTTCAAGTGATGAATGGACTTTTGGGTGGTTTTGCTCATTCAAAATTATTTACCAATGTCCGTGAAAAGGCAAGTT
TAGCTTATTCAATTTCATCAACTTTTGATTCCTTCACGGGCTTTTTAAAAATTGCAGCAGGAATTGATGCTGAAAATTTT
GAAGAAGCAAGAGGTTTAATATTTGAACAACTTGAAGCAATTAAAAGAGGGGATTTTACAGAGTTAGAAGTTGAGCAAAC
GAAAACAATGTTAAGAAATGCTTATTTTATAGGTCAAGATTCTCCATCAAATAATATTGAATTAGAATACGTAAAAGCGC
TCATTCCAGATAAATTTTTACCGATGTCTGAATTTTTAAACGCACTTGAATCAGTGTCAAAAGCAGATTTGATAAGAGTT
GCCAAATTACTAAGTCTACAGGCAGAATATTTTATGAAAGGATTTACTGTGAATCAGGAAAATATGGAGGTCAGCCTTGA
AAAGTAA

Upstream 100 bases:

>100_bases
TTTTGTTAGGAAATCTCACAAAATCGCCTCAGATTTTAGTATAATAAGGGTTGCATTAAGAACTAGTAAAAGCTTGATAA
AATAGGAAAGTGATAGTCAA

Downstream 100 bases:

>100_bases
GTTTTATGAAAAAACAGGGGAAAGATTATATATAGATACTTTACTCAATGGTTTGACTGTTTATTATCTGCCAAAGGCAG
ACTATAACCGAACTTATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTEIKMADGVMLHVIKETKFKTVRLMVRFREELSADRLGKRVLLSNMLESTNAVYQTGKDFSRKLSEMFGASFTTGVAKK
GKQHLLSLNMSFVNPRLVDFDTLGAAVDFLKIAIFQPDASQGQFNPEIFKREQRNLLHYLASMNDDRAYYASRQLANLFF
ENVNQALPSVGTSELIAKENPQDLFEYYQKMLAENAIDIFVLGDVDEKRVIDLFSDFNFTDRAVSKEIFYQQSLTELSVL
TEEKEVAQSILQLAYQMPVAYGDENYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISSTFDSFTGFLKIAAGIDAENF
EEARGLIFEQLEAIKRGDFTELEVEQTKTMLRNAYFIGQDSPSNNIELEYVKALIPDKFLPMSEFLNALESVSKADLIRV
AKLLSLQAEYFMKGFTVNQENMEVSLEK

Sequences:

>Translated_428_residues
MTEIKMADGVMLHVIKETKFKTVRLMVRFREELSADRLGKRVLLSNMLESTNAVYQTGKDFSRKLSEMFGASFTTGVAKK
GKQHLLSLNMSFVNPRLVDFDTLGAAVDFLKIAIFQPDASQGQFNPEIFKREQRNLLHYLASMNDDRAYYASRQLANLFF
ENVNQALPSVGTSELIAKENPQDLFEYYQKMLAENAIDIFVLGDVDEKRVIDLFSDFNFTDRAVSKEIFYQQSLTELSVL
TEEKEVAQSILQLAYQMPVAYGDENYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISSTFDSFTGFLKIAAGIDAENF
EEARGLIFEQLEAIKRGDFTELEVEQTKTMLRNAYFIGQDSPSNNIELEYVKALIPDKFLPMSEFLNALESVSKADLIRV
AKLLSLQAEYFMKGFTVNQENMEVSLEK
>Mature_427_residues
TEIKMADGVMLHVIKETKFKTVRLMVRFREELSADRLGKRVLLSNMLESTNAVYQTGKDFSRKLSEMFGASFTTGVAKKG
KQHLLSLNMSFVNPRLVDFDTLGAAVDFLKIAIFQPDASQGQFNPEIFKREQRNLLHYLASMNDDRAYYASRQLANLFFE
NVNQALPSVGTSELIAKENPQDLFEYYQKMLAENAIDIFVLGDVDEKRVIDLFSDFNFTDRAVSKEIFYQQSLTELSVLT
EEKEVAQSILQLAYQMPVAYGDENYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISSTFDSFTGFLKIAAGIDAENFE
EARGLIFEQLEAIKRGDFTELEVEQTKTMLRNAYFIGQDSPSNNIELEYVKALIPDKFLPMSEFLNALESVSKADLIRVA
KLLSLQAEYFMKGFTVNQENMEVSLEK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 48574; Mature: 48443

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIKMADGVMLHVIKETKFKTVRLMVRFREELSADRLGKRVLLSNMLESTNAVYQTGKD
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHH
FSRKLSEMFGASFTTGVAKKGKQHLLSLNMSFVNPRLVDFDTLGAAVDFLKIAIFQPDAS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHEEECCCCC
QGQFNPEIFKREQRNLLHYLASMNDDRAYYASRQLANLFFENVNQALPSVGTSELIAKEN
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
PQDLFEYYQKMLAENAIDIFVLGDVDEKRVIDLFSDFNFTDRAVSKEIFYQQSLTELSVL
HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TEEKEVAQSILQLAYQMPVAYGDENYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISS
HHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFDSFTGFLKIAAGIDAENFEEARGLIFEQLEAIKRGDFTELEVEQTKTMLRNAYFIGQD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHEEEECC
SPSNNIELEYVKALIPDKFLPMSEFLNALESVSKADLIRVAKLLSLQAEYFMKGFTVNQE
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC
NMEVSLEK
CCEEEECC
>Mature Secondary Structure 
TEIKMADGVMLHVIKETKFKTVRLMVRFREELSADRLGKRVLLSNMLESTNAVYQTGKD
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHH
FSRKLSEMFGASFTTGVAKKGKQHLLSLNMSFVNPRLVDFDTLGAAVDFLKIAIFQPDAS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHEEECCCCC
QGQFNPEIFKREQRNLLHYLASMNDDRAYYASRQLANLFFENVNQALPSVGTSELIAKEN
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
PQDLFEYYQKMLAENAIDIFVLGDVDEKRVIDLFSDFNFTDRAVSKEIFYQQSLTELSVL
HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TEEKEVAQSILQLAYQMPVAYGDENYLALQVMNGLLGGFAHSKLFTNVREKASLAYSISS
HHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFDSFTGFLKIAAGIDAENFEEARGLIFEQLEAIKRGDFTELEVEQTKTMLRNAYFIGQD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHEEEECC
SPSNNIELEYVKALIPDKFLPMSEFLNALESVSKADLIRVAKLLSLQAEYFMKGFTVNQE
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC
NMEVSLEK
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]