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The map label for this gene is ps440

Identifier: 125624873

GI number: 125624873

Start: 2087720

End: 2088118

Strand: Reverse

Name: ps440

Synonym: llmg_2102

Alternate gene names: NA

Gene position: 2088118-2087720 (Counterclockwise)

Preceding gene: 125624874

Following gene: 125624872

Centisome position: 82.55

GC content: 32.83

Gene sequence:

>399_bases
ATGAATAGTAAAGAAGTAAAAAAAATATCTGACACTCCTCCTACTTATTTTGGCGGAATAGCAAGATATATGTGGCGGAG
AATCGTTCCGCTACTTAATGAGCAGTACGATGTTAATTTATTAGATAGAACTCTTATAGAATCTTTATGCATAAATTATC
AAATATTTAGAGATTCTTATGAGTCTATCAAGAAAAATAAAACTCAATACATTACAGAAAATGGATTGATAAAATCCAAT
ACGGCAGTTTCTGATATTGACAAGGCAAGTAAAAATATCAAAGCAGCTTGCGACGCTTTAGGAATGACGCCTAAAAGTAG
AAGTGACCTGTTAAATTTGCCGAAAGTTGTTGAAGAAAATGAAGATGATGGAATGGGGGATTTCTTCGATGAAGATTGA

Upstream 100 bases:

>100_bases
AAGTTTTTTTCAGGGGTGTTAAATCTTGATAAAATGCACTATTAAGCTATTTTGGCTAAAAAAGTGTACCCCCAAACTTA
TACACCAAGAAGGAGGAAAT

Downstream 100 bases:

>100_bases
TTTAACTCAAACCCATGACGTTATCGGCACATATCATTCGCTAAATTATGAAGATATTAGAGAAGAATATCAAGACCCTG
CTACAAAATATGCTTTTGAT

Product: phage terminase small subunit

Products: NA

Alternate protein names: P27 Family Phage Terminase Small Subunit; Phage Terminase; Terminase Small Subunit

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNSKEVKKISDTPPTYFGGIARYMWRRIVPLLNEQYDVNLLDRTLIESLCINYQIFRDSYESIKKNKTQYITENGLIKSN
TAVSDIDKASKNIKAACDALGMTPKSRSDLLNLPKVVEENEDDGMGDFFDED

Sequences:

>Translated_132_residues
MNSKEVKKISDTPPTYFGGIARYMWRRIVPLLNEQYDVNLLDRTLIESLCINYQIFRDSYESIKKNKTQYITENGLIKSN
TAVSDIDKASKNIKAACDALGMTPKSRSDLLNLPKVVEENEDDGMGDFFDED
>Mature_132_residues
MNSKEVKKISDTPPTYFGGIARYMWRRIVPLLNEQYDVNLLDRTLIESLCINYQIFRDSYESIKKNKTQYITENGLIKSN
TAVSDIDKASKNIKAACDALGMTPKSRSDLLNLPKVVEENEDDGMGDFFDED

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15079; Mature: 15079

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKEVKKISDTPPTYFGGIARYMWRRIVPLLNEQYDVNLLDRTLIESLCINYQIFRDSY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ESIKKNKTQYITENGLIKSNTAVSDIDKASKNIKAACDALGMTPKSRSDLLNLPKVVEEN
HHHHHCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHCCC
EDDGMGDFFDED
CCCCCCCCCCCC
>Mature Secondary Structure
MNSKEVKKISDTPPTYFGGIARYMWRRIVPLLNEQYDVNLLDRTLIESLCINYQIFRDSY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ESIKKNKTQYITENGLIKSNTAVSDIDKASKNIKAACDALGMTPKSRSDLLNLPKVVEEN
HHHHHCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHCCC
EDDGMGDFFDED
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA