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The map label for this gene is ps439

Identifier: 125624874

GI number: 125624874

Start: 2088300

End: 2088818

Strand: Reverse

Name: ps439

Synonym: llmg_2103

Alternate gene names: NA

Gene position: 2088818-2088300 (Counterclockwise)

Preceding gene: 125624875

Following gene: 125624873

Centisome position: 82.58

GC content: 39.5

Gene sequence:

>519_bases
ATGCCAATGACTGGACGCTGTCGTGAGCCTAACTGCCACGCTGTAGTTGTTAGACCACTGCACTATTGTACTAAGCACGC
TGATAAAGAAGCAGTATATCAAGCAAGCAGGGAGCGATGGACTAATCGTACTGATAATAGTAAACGATACAAGGACTATA
ACAAACGTAAGCGTGAGTATAGCGACATTAAAGTAGAGCAGAATAAGTTCTACCAGAGCAAGCAATGGAAGTCTATACGT
GATGTAGTAAGACGTAGAGATAACTTCCTTTGTCAGTACTGCAAAGCGCATAATAGAGTACGAACTGGTAAGATAGTGGA
CCACATCGTGCCAGTTGAGTTTGACTTGAATGGTAAGACCGTGATGGATAACTTGGCCTTCTGTTGTAGCAAATGCCACA
CAAGGAAAACTAAGTGGGAACAAATTTATTATGGGACTGGTTACGGAAATAAAACTAAAAATGTAATCCCCATAAAAAAT
ATAAAAGATGTCCCTGATTTTCAAAAAAATGAACAATAA

Upstream 100 bases:

>100_bases
GATTATTGATACTTTTAAAGATTGCTTTGACCAACTACCTGAACCATGTAAGCAAGTATTGATTGTTTATAGTAACTATG
ATAAGGGTGGTGATTAATAT

Downstream 100 bases:

>100_bases
TTTTTAATAACCCTCCCCCCTATCTTTTCACAGGGAAAGCACACACATAGGTCTCAGCTTATGCCACAGACCAATTTTCA
AAAGTTTTTTTCAGGGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Restriction Endonuclease; HNH Endonuclease; Phage HNH Endonuclease Family; HNH Nuclease

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPMTGRCREPNCHAVVVRPLHYCTKHADKEAVYQASRERWTNRTDNSKRYKDYNKRKREYSDIKVEQNKFYQSKQWKSIR
DVVRRRDNFLCQYCKAHNRVRTGKIVDHIVPVEFDLNGKTVMDNLAFCCSKCHTRKTKWEQIYYGTGYGNKTKNVIPIKN
IKDVPDFQKNEQ

Sequences:

>Translated_172_residues
MPMTGRCREPNCHAVVVRPLHYCTKHADKEAVYQASRERWTNRTDNSKRYKDYNKRKREYSDIKVEQNKFYQSKQWKSIR
DVVRRRDNFLCQYCKAHNRVRTGKIVDHIVPVEFDLNGKTVMDNLAFCCSKCHTRKTKWEQIYYGTGYGNKTKNVIPIKN
IKDVPDFQKNEQ
>Mature_171_residues
PMTGRCREPNCHAVVVRPLHYCTKHADKEAVYQASRERWTNRTDNSKRYKDYNKRKREYSDIKVEQNKFYQSKQWKSIRD
VVRRRDNFLCQYCKAHNRVRTGKIVDHIVPVEFDLNGKTVMDNLAFCCSKCHTRKTKWEQIYYGTGYGNKTKNVIPIKNI
KDVPDFQKNEQ

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20615; Mature: 20484

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMTGRCREPNCHAVVVRPLHYCTKHADKEAVYQASRERWTNRTDNSKRYKDYNKRKREY
CCCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SDIKVEQNKFYQSKQWKSIRDVVRRRDNFLCQYCKAHNRVRTGKIVDHIVPVEFDLNGKT
HCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECEEECCCCHH
VMDNLAFCCSKCHTRKTKWEQIYYGTGYGNKTKNVIPIKNIKDVPDFQKNEQ
HHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PMTGRCREPNCHAVVVRPLHYCTKHADKEAVYQASRERWTNRTDNSKRYKDYNKRKREY
CCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SDIKVEQNKFYQSKQWKSIRDVVRRRDNFLCQYCKAHNRVRTGKIVDHIVPVEFDLNGKT
HCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECEEECCCCHH
VMDNLAFCCSKCHTRKTKWEQIYYGTGYGNKTKNVIPIKNIKDVPDFQKNEQ
HHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA