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The map label for this gene is oppA2 [H]

Identifier: 125624799

GI number: 125624799

Start: 2009303

End: 2011105

Strand: Reverse

Name: oppA2 [H]

Synonym: llmg_2024

Alternate gene names: 125624799

Gene position: 2011105-2009303 (Counterclockwise)

Preceding gene: 125624800

Following gene: 125624796

Centisome position: 79.51

GC content: 38.44

Gene sequence:

>1803_bases
ATGAAAAAATTGAATATAACTTTATTGGCAACGACTGCAGTTTTAGCAACTGCACTCTTGAGCGCTTGTGGCTCCAACCA
AAGCTCAAGTACAAGCACTACAAAATTAAAAGCCGGAAGTTTTGATGTGGCTTACAAAAATCCGGACAAGGCTATCAAAG
GTGGGGATCTAAAAGTTGCCTATCAAAGTGACTCCCCAATGAAAGCCGAATGGCTGGCTGGACTTGAGAATGATGCTACC
TTTGCTGCGATGGCTAGTCCAGCAGGTGGATTAGATGGAATTTTCTTTACAAATAGTGCTTTTAAATTTATCAATGGTGG
TCCTGCGAATATCAGCCTTGATGATTCTGCAAAAACAGCAACAATTACCTTGCGTAAAGATTTGAAGTGGTCTGATGGCT
CGCAAGTTACGGCTAAAGACTATGAATTTACTTATGAAACAATCGCTAATCCTGCTTATGGCTCTGACCGTTGGACCGAT
TCTTTAGCCAATATCGTTGGTTTGAGTGATTATCATACAGGTAAAGCAAAAACAATCTCAGGCATTACTTTCCCAGATGG
TGAAAATGGTAAGGTTATCAAGATTCAATTTAAAGAAATGACACCAGGAATGACTCAATCAGGGAATGGCTATTTCCTTG
AAACAGTGACTCCTTATCAATACTTGAAAGACGTGGCGCCTAAAGACTTGGCTTCAAGTCCAAAAACGACAACAAAACCA
TTAGTCACAGGTCCTTTCAAACCAGCAAATGTTGTCGCTGGCGAATCAATCAAATATGTACCAAATCCATATTATTGGGG
CGAAAAACCAAAATTAAACTCTATCACCTATGAAACAGTTTCAACAAATAAATCAGTTGCTGCTCTCTCATCTGGTAAAT
ATGACTTCATCAATTCTATGGTCGCTAGTCAGTACAAACAAGTGAAGAACTTGAAGGGCTATAAAGTTCTTGGTCAACAA
GCACTCTATATCTCACTGATGTACTACAATCTTGGACATTATGACACAAAAAATTCAATCAATGTTCAAGACCGTAAGAC
ACCATTGCAAGACCAAAGTGTTCGTCAGGCTGTTGCTTATGCTCGTAATGTTGCAGAGGTTGACAATAAGTTCTCTAACG
GACTTGCAACCCCTGCAAATGGTTTAATTCCACCTATCTTTAAACAGTTTACAAGTTCATCAGTCAAAGGTTATGAAAAA
CAAAATCTTGACAAGGCAAATAAACTTTTGGATGCAGATGGTTGGAAACTCAATAAGTCTACAGGCTACCGTGAAAAAGA
TGGAAAAGAATTATCGCTTGTCTATGCAGCGCGTCAAGGAGATGCTAATCAAGAAACCATCGCTCAAAACTATATCCAAC
AATGGAAGAAGATTGGTGTAAAAGTGAGTCTTTACAATGGTAAATTGATGGAATTTAATTCTTGGGTTGATCATATGACG
ACTCCTCCAGGAGCAGATGACTGGGATATTACCGATGGGGCTTGGTCACTTTCGTCAGAACCATCTCAACAAGATTTATT
CTCAGCAGCAGCCCCTTATAATATTGGTCACTTTAACGACCCACAAATTACGAATGATTTGAATGATATTGATTCAACTA
AGTCAGAAAGTGCAACTTATCGTAAAGCCGCTTTTGTTAAATATCAAAATGATATGAATAAAAAAGCTTATGTTGTTCCA
ACCAACTTTTCATTAAATTACACACCAGTTAACAAACGTTTGGTCGGAATGACACTTGACTATGGGGATATGAACCTTTG
GTCAGAAATTGGAGTCTCTTCTAATAAGATGGCTACCAAATAA

Upstream 100 bases:

>100_bases
AGAATATAAAAAATAGTTTGACAAAAATAAAATTAGTGATATAATCTAAAAATTCTAGTTAAACTAGAAATAAAACTTAA
TTTTTCGGGAGAAAATTAAC

Downstream 100 bases:

>100_bases
TTTTAATTAACTATGTTTACAAGTTTTTTTGTAAAAATACCCTCACTTTAGTTCGCAATCTAAAGTCAAAGAAATTCAAG
TCTATGATTTGAATTTCTTT

Product: oligopeptide-binding protein oppA2 precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MKKLNITLLATTAVLATALLSACGSNQSSSTSTTKLKAGSFDVAYKNPDKAIKGGDLKVAYQSDSPMKAEWLAGLENDAT
FAAMASPAGGLDGIFFTNSAFKFINGGPANISLDDSAKTATITLRKDLKWSDGSQVTAKDYEFTYETIANPAYGSDRWTD
SLANIVGLSDYHTGKAKTISGITFPDGENGKVIKIQFKEMTPGMTQSGNGYFLETVTPYQYLKDVAPKDLASSPKTTTKP
LVTGPFKPANVVAGESIKYVPNPYYWGEKPKLNSITYETVSTNKSVAALSSGKYDFINSMVASQYKQVKNLKGYKVLGQQ
ALYISLMYYNLGHYDTKNSINVQDRKTPLQDQSVRQAVAYARNVAEVDNKFSNGLATPANGLIPPIFKQFTSSSVKGYEK
QNLDKANKLLDADGWKLNKSTGYREKDGKELSLVYAARQGDANQETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
TPPGADDWDITDGAWSLSSEPSQQDLFSAAAPYNIGHFNDPQITNDLNDIDSTKSESATYRKAAFVKYQNDMNKKAYVVP
TNFSLNYTPVNKRLVGMTLDYGDMNLWSEIGVSSNKMATK

Sequences:

>Translated_600_residues
MKKLNITLLATTAVLATALLSACGSNQSSSTSTTKLKAGSFDVAYKNPDKAIKGGDLKVAYQSDSPMKAEWLAGLENDAT
FAAMASPAGGLDGIFFTNSAFKFINGGPANISLDDSAKTATITLRKDLKWSDGSQVTAKDYEFTYETIANPAYGSDRWTD
SLANIVGLSDYHTGKAKTISGITFPDGENGKVIKIQFKEMTPGMTQSGNGYFLETVTPYQYLKDVAPKDLASSPKTTTKP
LVTGPFKPANVVAGESIKYVPNPYYWGEKPKLNSITYETVSTNKSVAALSSGKYDFINSMVASQYKQVKNLKGYKVLGQQ
ALYISLMYYNLGHYDTKNSINVQDRKTPLQDQSVRQAVAYARNVAEVDNKFSNGLATPANGLIPPIFKQFTSSSVKGYEK
QNLDKANKLLDADGWKLNKSTGYREKDGKELSLVYAARQGDANQETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
TPPGADDWDITDGAWSLSSEPSQQDLFSAAAPYNIGHFNDPQITNDLNDIDSTKSESATYRKAAFVKYQNDMNKKAYVVP
TNFSLNYTPVNKRLVGMTLDYGDMNLWSEIGVSSNKMATK
>Mature_600_residues
MKKLNITLLATTAVLATALLSACGSNQSSSTSTTKLKAGSFDVAYKNPDKAIKGGDLKVAYQSDSPMKAEWLAGLENDAT
FAAMASPAGGLDGIFFTNSAFKFINGGPANISLDDSAKTATITLRKDLKWSDGSQVTAKDYEFTYETIANPAYGSDRWTD
SLANIVGLSDYHTGKAKTISGITFPDGENGKVIKIQFKEMTPGMTQSGNGYFLETVTPYQYLKDVAPKDLASSPKTTTKP
LVTGPFKPANVVAGESIKYVPNPYYWGEKPKLNSITYETVSTNKSVAALSSGKYDFINSMVASQYKQVKNLKGYKVLGQQ
ALYISLMYYNLGHYDTKNSINVQDRKTPLQDQSVRQAVAYARNVAEVDNKFSNGLATPANGLIPPIFKQFTSSSVKGYEK
QNLDKANKLLDADGWKLNKSTGYREKDGKELSLVYAARQGDANQETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
TPPGADDWDITDGAWSLSSEPSQQDLFSAAAPYNIGHFNDPQITNDLNDIDSTKSESATYRKAAFVKYQNDMNKKAYVVP
TNFSLNYTPVNKRLVGMTLDYGDMNLWSEIGVSSNKMATK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 65779; Mature: 65779

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNITLLATTAVLATALLSACGSNQSSSTSTTKLKAGSFDVAYKNPDKAIKGGDLKVA
CCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEE
YQSDSPMKAEWLAGLENDATFAAMASPAGGLDGIFFTNSAFKFINGGPANISLDDSAKTA
ECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCEEEECCCCCEEEECCCCCEE
TITLRKDLKWSDGSQVTAKDYEFTYETIANPAYGSDRWTDSLANIVGLSDYHTGKAKTIS
EEEEEECCCCCCCCEEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE
GITFPDGENGKVIKIQFKEMTPGMTQSGNGYFLETVTPYQYLKDVAPKDLASSPKTTTKP
CEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHCCCCCCCCCC
LVTGPFKPANVVAGESIKYVPNPYYWGEKPKLNSITYETVSTNKSVAALSSGKYDFINSM
EEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHH
VASQYKQVKNLKGYKVLGQQALYISLMYYNLGHYDTKNSINVQDRKTPLQDQSVRQAVAY
HHHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ARNVAEVDNKFSNGLATPANGLIPPIFKQFTSSSVKGYEKQNLDKANKLLDADGWKLNKS
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCHHHHHHHCCCCCCEECCC
TGYREKDGKELSLVYAARQGDANQETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCEEEEEHHHHHHCC
TPPGADDWDITDGAWSLSSEPSQQDLFSAAAPYNIGHFNDPQITNDLNDIDSTKSESATY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHH
RKAAFVKYQNDMNKKAYVVPTNFSLNYTPVNKRLVGMTLDYGDMNLWSEIGVSSNKMATK
HHHEEEEECCCCCCEEEEEECCCEEEECCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKLNITLLATTAVLATALLSACGSNQSSSTSTTKLKAGSFDVAYKNPDKAIKGGDLKVA
CCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEE
YQSDSPMKAEWLAGLENDATFAAMASPAGGLDGIFFTNSAFKFINGGPANISLDDSAKTA
ECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCEEEECCCCCEEEECCCCCEE
TITLRKDLKWSDGSQVTAKDYEFTYETIANPAYGSDRWTDSLANIVGLSDYHTGKAKTIS
EEEEEECCCCCCCCEEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE
GITFPDGENGKVIKIQFKEMTPGMTQSGNGYFLETVTPYQYLKDVAPKDLASSPKTTTKP
CEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHCCCCCCCCCC
LVTGPFKPANVVAGESIKYVPNPYYWGEKPKLNSITYETVSTNKSVAALSSGKYDFINSM
EEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHH
VASQYKQVKNLKGYKVLGQQALYISLMYYNLGHYDTKNSINVQDRKTPLQDQSVRQAVAY
HHHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ARNVAEVDNKFSNGLATPANGLIPPIFKQFTSSSVKGYEKQNLDKANKLLDADGWKLNKS
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCHHHHHHHCCCCCCEECCC
TGYREKDGKELSLVYAARQGDANQETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCEEEEEHHHHHHCC
TPPGADDWDITDGAWSLSSEPSQQDLFSAAAPYNIGHFNDPQITNDLNDIDSTKSESATY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHH
RKAAFVKYQNDMNKKAYVVPTNFSLNYTPVNKRLVGMTLDYGDMNLWSEIGVSSNKMATK
HHHEEEEECCCCCCEEEEEECCCEEEECCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8244921 [H]