Click here to switch to the map view.

The map label for this gene is yjeM [H]

Identifier: 125624770

GI number: 125624770

Start: 1981100

End: 1982623

Strand: Reverse

Name: yjeM [H]

Synonym: llmg_1993

Alternate gene names: 125624770

Gene position: 1982623-1981100 (Counterclockwise)

Preceding gene: 125624771

Following gene: 125624768

Centisome position: 78.38

GC content: 37.4

Gene sequence:

>1524_bases
ATGTCACAAAACACAAAAGGTAAACTCTCACTCGTAGGTCTCTCGTTGATGATCTTTACGACTGTCTTTGGCTTTGGGAA
TATCCCAGTTGCCTTCTATCAAATGGGCTACGGTGCTATTCCTTGGTATATTATCGGAGCTCTCCTCTTTTTCCTCCCCT
TTGCCTTTATGGTAACGGAAATGGGATCAGCATTTAAAGATGAAAAAGGAGGAATCTACTCATGGATGAGTGAGGCAGTT
AATCCTACTTTCGCCTTTATTGGAACATTCATGTGGTATGCTTCTTATGTCATTTGGATGGTAAGTGTCGCAAATAAAAT
TTTGATTCCAATGGTGAATTTAATTTTTGGTAATTCAACACATACACCATCATTACTTTGGATTTCAATTGCAGCCGTTG
TTTGGATGGCCGTCATTACATTTATGGTATCTAAAGGGGTCGAAACAATTAAAAAATTCACCTCTATTGCTGGGATTGCC
GTTCTTTCGCTCAATGTTATTTTAATTCTTGGCGCAGTTCTTGTACTAGTTGTTAATGGACATCCTGCAACACCAATTAA
CCTTGCTGCTTTTACGTCATCTCCTAATCCAACTTTTGATGGTAGTATCGTTGCTTTTATCGCCTTTCTTGTCTTTGCTG
TATTTGCCTATGGTGGGGTAGAATCAATCGCCGGTTTAGTCGATCAAACACATGAACCAGAGAAAAACTTCCCTCGTGGA
ATTATTACATCAGCACTTATTATTGCCGTGGGTTACTCAGTAGCTATTCTTAGCGTTGGATTCTTTGTTGATTATTCACA
ATGGATTCCAGCAATAAAAGATGGGTCAATGAACCTTGGAACTGTTCCTTATATGCTTTTGCAAAATCTTGGTGAAGCAG
TTGGTCATGCACTTGGACTTTCTACTTCTGGAGCGGATATGCTTGGTGGAATTTTTGCCCGTTATATTGGTCTTTCAATG
CTTCTTGCCTATATGGGTGCTTTCTTTACCTTAACTTACAGCCCAATCAAACAGTTGATTACTGGTACACCAGAAAAACT
TTGGCCTGGTAAATTAGGTAAACTTGATGAAGAAGGTATGCCAAAATTTGCAATGTGGATTCAATTTGCAATTGTTACTT
TGATTATTGTTTTGAATTTCTTGACTTCACAAGGTGGTGCAAGTCAATTCTTCCTCATTTTGACTTATATGGCTAATGTT
TCTATGACCTTGCCTTATCTCTTTATCGTTATTGCTTTCTGGTACTTCAAGAAAAATAAAAATATTGCTAAACCAATTGA
GTTCTTTAAATCAAACTTCGTTGTTAATTTCTTGACAATTTTGGTCTTGGTAGTCGTTGGTGGCGCGAACTTCTTCACAA
TTATTCAACCGATTGTGAACTATGTCCAATTACCAGCCGTTGACCAAACTGCAAAAGCATTATCAGAAATGTTGACCTCA
TTTATCTCAATGATTGGTGGACCACTTATCTTTGGTATTATTGCTTACTTCATGATGCGTAATTATAAAAAGAAAAATAA
GTAA

Upstream 100 bases:

>100_bases
ATTTTACTGACAGATTTATAAGTAAAATTTAGTTAATCATTCAACACTTTAAAAATAAATTGGTTGATAAAATTATTAAT
CAATGTAAAAAGGAAAGATT

Downstream 100 bases:

>100_bases
GACTAAATTATCTTTCAAAAAAAGCTGAGTATCTACTCAGCTTTTTTTATATTCAGATATTTTGTCAATGAAAAGTGTGC
CATATTTTTCAAGTTTAACT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MSQNTKGKLSLVGLSLMIFTTVFGFGNIPVAFYQMGYGAIPWYIIGALLFFLPFAFMVTEMGSAFKDEKGGIYSWMSEAV
NPTFAFIGTFMWYASYVIWMVSVANKILIPMVNLIFGNSTHTPSLLWISIAAVVWMAVITFMVSKGVETIKKFTSIAGIA
VLSLNVILILGAVLVLVVNGHPATPINLAAFTSSPNPTFDGSIVAFIAFLVFAVFAYGGVESIAGLVDQTHEPEKNFPRG
IITSALIIAVGYSVAILSVGFFVDYSQWIPAIKDGSMNLGTVPYMLLQNLGEAVGHALGLSTSGADMLGGIFARYIGLSM
LLAYMGAFFTLTYSPIKQLITGTPEKLWPGKLGKLDEEGMPKFAMWIQFAIVTLIIVLNFLTSQGGASQFFLILTYMANV
SMTLPYLFIVIAFWYFKKNKNIAKPIEFFKSNFVVNFLTILVLVVVGGANFFTIIQPIVNYVQLPAVDQTAKALSEMLTS
FISMIGGPLIFGIIAYFMMRNYKKKNK

Sequences:

>Translated_507_residues
MSQNTKGKLSLVGLSLMIFTTVFGFGNIPVAFYQMGYGAIPWYIIGALLFFLPFAFMVTEMGSAFKDEKGGIYSWMSEAV
NPTFAFIGTFMWYASYVIWMVSVANKILIPMVNLIFGNSTHTPSLLWISIAAVVWMAVITFMVSKGVETIKKFTSIAGIA
VLSLNVILILGAVLVLVVNGHPATPINLAAFTSSPNPTFDGSIVAFIAFLVFAVFAYGGVESIAGLVDQTHEPEKNFPRG
IITSALIIAVGYSVAILSVGFFVDYSQWIPAIKDGSMNLGTVPYMLLQNLGEAVGHALGLSTSGADMLGGIFARYIGLSM
LLAYMGAFFTLTYSPIKQLITGTPEKLWPGKLGKLDEEGMPKFAMWIQFAIVTLIIVLNFLTSQGGASQFFLILTYMANV
SMTLPYLFIVIAFWYFKKNKNIAKPIEFFKSNFVVNFLTILVLVVVGGANFFTIIQPIVNYVQLPAVDQTAKALSEMLTS
FISMIGGPLIFGIIAYFMMRNYKKKNK
>Mature_506_residues
SQNTKGKLSLVGLSLMIFTTVFGFGNIPVAFYQMGYGAIPWYIIGALLFFLPFAFMVTEMGSAFKDEKGGIYSWMSEAVN
PTFAFIGTFMWYASYVIWMVSVANKILIPMVNLIFGNSTHTPSLLWISIAAVVWMAVITFMVSKGVETIKKFTSIAGIAV
LSLNVILILGAVLVLVVNGHPATPINLAAFTSSPNPTFDGSIVAFIAFLVFAVFAYGGVESIAGLVDQTHEPEKNFPRGI
ITSALIIAVGYSVAILSVGFFVDYSQWIPAIKDGSMNLGTVPYMLLQNLGEAVGHALGLSTSGADMLGGIFARYIGLSML
LAYMGAFFTLTYSPIKQLITGTPEKLWPGKLGKLDEEGMPKFAMWIQFAIVTLIIVLNFLTSQGGASQFFLILTYMANVS
MTLPYLFIVIAFWYFKKNKNIAKPIEFFKSNFVVNFLTILVLVVVGGANFFTIIQPIVNYVQLPAVDQTAKALSEMLTSF
ISMIGGPLIFGIIAYFMMRNYKKKNK

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082380, Length=513, Percent_Identity=47.1734892787524, Blast_Score=432, Evalue=1e-122,
Organism=Escherichia coli, GI87081798, Length=438, Percent_Identity=27.3972602739726, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI48994921, Length=414, Percent_Identity=26.0869565217391, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1787768, Length=425, Percent_Identity=22.1176470588235, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 55471; Mature: 55340

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQNTKGKLSLVGLSLMIFTTVFGFGNIPVAFYQMGYGAIPWYIIGALLFFLPFAFMVTE
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]