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The map label for this gene is sufB [H]

Identifier: 125624747

GI number: 125624747

Start: 1950420

End: 1951832

Strand: Reverse

Name: sufB [H]

Synonym: llmg_1969

Alternate gene names: 125624747

Gene position: 1951832-1950420 (Counterclockwise)

Preceding gene: 125624748

Following gene: 125624746

Centisome position: 77.16

GC content: 36.31

Gene sequence:

>1413_bases
ATGACAGAAAATAGTACACAAGAAGTCGTCAAAGACCTCGAAGAATATAAATTTGGATTTCATGATAATGCAGAACTTGA
ATTCACAACCGGTTTAGGCTTGACCGAGGAAGTCATTCGCGAAATTTCTGAAACTAAAAACGAGCCTGAATGGATGTTAG
AATTTCGCTTAAAATCTTTTGAAGCTTTTAAAAAGCTAGATATGCCAAAATGGGGACCAGATTTATCTGGTATTGATTTT
AATGATATCGTTTATTATCAAAAACCATCAGCAAAAGCGGCTCGTTCTTGGGAGGATGTTCCTCAAGAAATCAAAGATAC
TTTTGAAAAAATTGGTATTCCAGAGGCTGAACGTTCATATTTGGCAGGAGCCTCAGCCCAATATGAATCAGAAGTTGTTT
ATCATAATATGAAAGATGAATTTGAAAAATTAGGAATTATTTTCACTGACACTGATTCAGGCTTACGTGATTATCCAGAA
ATTTTCAAAAAATATTTCAGCAAACTTGTTCCGCCAACTGACAACAAATTAGCAGCTTTAAATTCTGCTGTCTGGTCTGG
AGGTTCATTTGTCTACGTTCCTAAAGGAGTCAAATGTGAGATTCCTATTCAAGCTTATTTCCGTATTAATAACGAAAAAT
CAGGACAGTTTGAGCGGACATTGATTATTGTTGAAGAAGGAGCCTCTATTCAATATGTTGAAGGATGTACTGCTCCAACT
TATTCAGCGAGCTCACTTCATGCGGCAGTCGTTGAAATCTTTGTTGAAGAAGGTGGCTACATGCGCTACTCTACCATTCA
AAACTGGTCAGATAATGTTTATAACTTAGTGACTAAACGTGCGGCTGCAGAAAAAAATGCAACCGTTGAATGGATTGATG
GGAATCTTGGTTCAAAAGTATCCATGAAATATCCTGCTGTGCATTTAAATGGGCCAGGAGCGCGTGGAACAATGCTTTCA
ATCGCTTTTGCTGGAGCAAATCAAAATCAAGATACAGGTGCTAAAATGATTCATAATGCACCAAATACTTCAAGCTCAAT
TATTTCAAAATCAATTGCCAAAAATGGTGGAGCAGTCAATTATCGCGGGCAAGTTACTTTTGGGAAAAATTCTAAAAAAT
CAGCTTCTCATATTGAATGTGACACAATTTTGATGGACGACTTATCAAAATCAGATACCGTTCCATTCAATGAAATTCAC
AATTCACAAGTTGCCTTAGAGCATGAAGCGAAAGTTTCAAAAATTTCTGAAGAACAACTTTATTACTTGATGAGTCGTGG
ATTGACAGAAAAAGAAGCCACAGATATGATTGTCATGGGATTCATTGAACCATTTACCAAGGAATTACCAATGGAATATG
CTGTTGAATTAAATCGTTTGATTTCTTATTCAATGGAAGGTTCTATCGGGTAA

Upstream 100 bases:

>100_bases
AATAGCTAAAATTTACTGACAGATTTTTTATCAGTAAATTAAAGACTTGTCAGCTAGGCTGAAAAGTCTGTCAATAATAA
AATGCCAAAGAGGAAGAAAA

Downstream 100 bases:

>100_bases
AATTCCCAAAAATCAGTACAAGTTACAGATTTATAATTTTAAAAATACTATTAAACGTTTCTTTATTAGATAAGAAGCGT
TTTTTTGTTGCCATCAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MTENSTQEVVKDLEEYKFGFHDNAELEFTTGLGLTEEVIREISETKNEPEWMLEFRLKSFEAFKKLDMPKWGPDLSGIDF
NDIVYYQKPSAKAARSWEDVPQEIKDTFEKIGIPEAERSYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSGLRDYPE
IFKKYFSKLVPPTDNKLAALNSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEKSGQFERTLIIVEEGASIQYVEGCTAPT
YSASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNLVTKRAAAEKNATVEWIDGNLGSKVSMKYPAVHLNGPGARGTMLS
IAFAGANQNQDTGAKMIHNAPNTSSSIISKSIAKNGGAVNYRGQVTFGKNSKKSASHIECDTILMDDLSKSDTVPFNEIH
NSQVALEHEAKVSKISEEQLYYLMSRGLTEKEATDMIVMGFIEPFTKELPMEYAVELNRLISYSMEGSIG

Sequences:

>Translated_470_residues
MTENSTQEVVKDLEEYKFGFHDNAELEFTTGLGLTEEVIREISETKNEPEWMLEFRLKSFEAFKKLDMPKWGPDLSGIDF
NDIVYYQKPSAKAARSWEDVPQEIKDTFEKIGIPEAERSYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSGLRDYPE
IFKKYFSKLVPPTDNKLAALNSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEKSGQFERTLIIVEEGASIQYVEGCTAPT
YSASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNLVTKRAAAEKNATVEWIDGNLGSKVSMKYPAVHLNGPGARGTMLS
IAFAGANQNQDTGAKMIHNAPNTSSSIISKSIAKNGGAVNYRGQVTFGKNSKKSASHIECDTILMDDLSKSDTVPFNEIH
NSQVALEHEAKVSKISEEQLYYLMSRGLTEKEATDMIVMGFIEPFTKELPMEYAVELNRLISYSMEGSIG
>Mature_469_residues
TENSTQEVVKDLEEYKFGFHDNAELEFTTGLGLTEEVIREISETKNEPEWMLEFRLKSFEAFKKLDMPKWGPDLSGIDFN
DIVYYQKPSAKAARSWEDVPQEIKDTFEKIGIPEAERSYLAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSGLRDYPEI
FKKYFSKLVPPTDNKLAALNSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEKSGQFERTLIIVEEGASIQYVEGCTAPTY
SASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNLVTKRAAAEKNATVEWIDGNLGSKVSMKYPAVHLNGPGARGTMLSI
AFAGANQNQDTGAKMIHNAPNTSSSIISKSIAKNGGAVNYRGQVTFGKNSKKSASHIECDTILMDDLSKSDTVPFNEIHN
SQVALEHEAKVSKISEEQLYYLMSRGLTEKEATDMIVMGFIEPFTKELPMEYAVELNRLISYSMEGSIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=460, Percent_Identity=39.3478260869565, Blast_Score=352, Evalue=4e-98,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=29.2207792207792, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52554; Mature: 52422

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENSTQEVVKDLEEYKFGFHDNAELEFTTGLGLTEEVIREISETKNEPEWMLEFRLKSF
CCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
EAFKKLDMPKWGPDLSGIDFNDIVYYQKPSAKAARSWEDVPQEIKDTFEKIGIPEAERSY
HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSGLRDYPEIFKKYFSKLVPPTDNKLAAL
HCCCCCCCCCHHHHCCHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
NSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEKSGQFERTLIIVEEGASIQYVEGCTAPT
HHHHCCCCCEEEECCCCEEEECEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCC
YSASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNLVTKRAAAEKNATVEWIDGNLGSKV
CCCHHHHHHHHHHHHHCCCEEEEEHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
SMKYPAVHLNGPGARGTMLSIAFAGANQNQDTGAKMIHNAPNTSSSIISKSIAKNGGAVN
EEECCEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEE
YRGQVTFGKNSKKSASHIECDTILMDDLSKSDTVPFNEIHNSQVALEHEAKVSKISEEQL
EEEEEEECCCCCCCCCCCEEEEHHHHCCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHH
YYLMSRGLTEKEATDMIVMGFIEPFTKELPMEYAVELNRLISYSMEGSIG
HHHHHCCCCCHHHCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TENSTQEVVKDLEEYKFGFHDNAELEFTTGLGLTEEVIREISETKNEPEWMLEFRLKSF
CCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
EAFKKLDMPKWGPDLSGIDFNDIVYYQKPSAKAARSWEDVPQEIKDTFEKIGIPEAERSY
HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LAGASAQYESEVVYHNMKDEFEKLGIIFTDTDSGLRDYPEIFKKYFSKLVPPTDNKLAAL
HCCCCCCCCCHHHHCCHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
NSAVWSGGSFVYVPKGVKCEIPIQAYFRINNEKSGQFERTLIIVEEGASIQYVEGCTAPT
HHHHCCCCCEEEECCCCEEEECEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCC
YSASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNLVTKRAAAEKNATVEWIDGNLGSKV
CCCHHHHHHHHHHHHHCCCEEEEEHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
SMKYPAVHLNGPGARGTMLSIAFAGANQNQDTGAKMIHNAPNTSSSIISKSIAKNGGAVN
EEECCEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEE
YRGQVTFGKNSKKSASHIECDTILMDDLSKSDTVPFNEIHNSQVALEHEAKVSKISEEQL
EEEEEEECCCCCCCCCCCEEEEHHHHCCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHH
YYLMSRGLTEKEATDMIVMGFIEPFTKELPMEYAVELNRLISYSMEGSIG
HHHHHCCCCCHHHCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]