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The map label for this gene is dedA [H]

Identifier: 125624720

GI number: 125624720

Start: 1920851

End: 1921510

Strand: Reverse

Name: dedA [H]

Synonym: llmg_1941

Alternate gene names: 125624720

Gene position: 1921510-1920851 (Counterclockwise)

Preceding gene: 125624723

Following gene: 125624719

Centisome position: 75.96

GC content: 36.97

Gene sequence:

>660_bases
ATGTTTGTACAACTTTCGATTTTTGGTTTCTTTAATGGAGTGGATGGCGGAATTTTGCCCAGATGCCTAATGGTCAACAT
TTGGATTTATGTTGTTTTAGGAGCGATTATCTTTATTGAAACAGGTTTAGTAATTTTCCCCTTTTTACCTGGGGATTCAA
TTTTGTTTTTCGTTGGTTCATTGGCGGCGATGTCAAACGGAAAATTATCAATCGGTTTACTTATTTTAGTGATGGGGATT
ATTGCTTTCGTTGCTAATCTACTAAATTACGAAATTGGACGACGTTTTGGCGATGTGATCCCAAAACATAAATGGCTTTC
TCGCTTTTTAAAACCAGAATATATGGAAGAAGCTCATCAATTTTTTGAAAAATGGGGTTCTTGGGCAATCTTCTTAGGAC
GATTCATGCCAATCATACGGACGGTTGTTCCTTTTACGGCTGGTGCTGGGAAAATGCCGCATAAAAAGTTTATCTTTTTT
AACTTTATCGGTGGATTTGCTTGGGTTATTGTCGCTTTGGGGGCAGGTTATCTATTTGGCGGAATTCCATTCGTTAAAAA
ACATTTTGAAATCATTATGATTGCGATTGTTTTTGTTTCATTATTGCCAGCGATAATTGGAGTTTTAAAGCGCGTTCTTA
GAAGTCGCAAGGAAGCTTAA

Upstream 100 bases:

>100_bases
TGTTGTAAAATTGAACGAGTGCTTGATAGAGATATTTATGTATTCTATTTAAGTAAACAGAACTACTGTAAGAATTTTTA
AACTTTTGAAAAGGGATATT

Downstream 100 bases:

>100_bases
CTTTATGATAAAATAGGACTTACAAAATTGTCAGTCCTTTTTTTATTGAATTGACGATTCAAAAACAAGAGAAGTTACTG
ACAAAACCATCAGCAACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MFVQLSIFGFFNGVDGGILPRCLMVNIWIYVVLGAIIFIETGLVIFPFLPGDSILFFVGSLAAMSNGKLSIGLLILVMGI
IAFVANLLNYEIGRRFGDVIPKHKWLSRFLKPEYMEEAHQFFEKWGSWAIFLGRFMPIIRTVVPFTAGAGKMPHKKFIFF
NFIGGFAWVIVALGAGYLFGGIPFVKKHFEIIMIAIVFVSLLPAIIGVLKRVLRSRKEA

Sequences:

>Translated_219_residues
MFVQLSIFGFFNGVDGGILPRCLMVNIWIYVVLGAIIFIETGLVIFPFLPGDSILFFVGSLAAMSNGKLSIGLLILVMGI
IAFVANLLNYEIGRRFGDVIPKHKWLSRFLKPEYMEEAHQFFEKWGSWAIFLGRFMPIIRTVVPFTAGAGKMPHKKFIFF
NFIGGFAWVIVALGAGYLFGGIPFVKKHFEIIMIAIVFVSLLPAIIGVLKRVLRSRKEA
>Mature_219_residues
MFVQLSIFGFFNGVDGGILPRCLMVNIWIYVVLGAIIFIETGLVIFPFLPGDSILFFVGSLAAMSNGKLSIGLLILVMGI
IAFVANLLNYEIGRRFGDVIPKHKWLSRFLKPEYMEEAHQFFEKWGSWAIFLGRFMPIIRTVVPFTAGAGKMPHKKFIFF
NFIGGFAWVIVALGAGYLFGGIPFVKKHFEIIMIAIVFVSLLPAIIGVLKRVLRSRKEA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=185, Percent_Identity=41.0810810810811, Blast_Score=164, Evalue=5e-42,
Organism=Escherichia coli, GI1789384, Length=175, Percent_Identity=34.8571428571429, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789481, Length=165, Percent_Identity=35.7575757575758, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24541; Mature: 24541

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVQLSIFGFFNGVDGGILPRCLMVNIWIYVVLGAIIFIETGLVIFPFLPGDSILFFVGS
CEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHH
LAAMSNGKLSIGLLILVMGIIAFVANLLNYEIGRRFGDVIPKHKWLSRFLKPEYMEEAHQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHH
FFEKWGSWAIFLGRFMPIIRTVVPFTAGAGKMPHKKFIFFNFIGGFAWVIVALGAGYLFG
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GIPFVKKHFEIIMIAIVFVSLLPAIIGVLKRVLRSRKEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFVQLSIFGFFNGVDGGILPRCLMVNIWIYVVLGAIIFIETGLVIFPFLPGDSILFFVGS
CEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHH
LAAMSNGKLSIGLLILVMGIIAFVANLLNYEIGRRFGDVIPKHKWLSRFLKPEYMEEAHQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHH
FFEKWGSWAIFLGRFMPIIRTVVPFTAGAGKMPHKKFIFFNFIGGFAWVIVALGAGYLFG
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GIPFVKKHFEIIMIAIVFVSLLPAIIGVLKRVLRSRKEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]