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The map label for this gene is yitU [H]

Identifier: 125624696

GI number: 125624696

Start: 1894647

End: 1895483

Strand: Direct

Name: yitU [H]

Synonym: llmg_1914

Alternate gene names: 125624696

Gene position: 1894647-1895483 (Clockwise)

Preceding gene: 125624687

Following gene: 125624697

Centisome position: 74.9

GC content: 37.99

Gene sequence:

>837_bases
ATGGAGAACTACAAAGAACGTAAACTGATTGCGATTGATTTAGATGGTACTACTTTGCAGTCCGATGGACGTTCAATCAG
CCGTTATACCAAATATATTTTTAAACAGGTAGAATCACTTGGACATATTATTTGCATCACAACTGGACGTCCTTTTAGAA
TGTCTTTGGATGTTTATCGTGAGCTTGAGTTGACTAGCCCGGTCATCAATTTTAATGGTGCTTTGATTTCAATGCCAAAT
GATAAAAACTGGGAACACACTAAGTCTTATTATATTGACCGTTCTTTTATTTTTGACCTTCTGCGTCATCAGCAAAACTT
TAATCTACATTTTTTTGCTGTTGAATATCGTAGAAAGTTCTTTCTAAACACTTTCCGTAACGTTGAACCTAAACTTTTTG
GTGTAGAAAAATTCCAGCCCTATAATCGTCTCCGGGCAGACCGAGTTACCGAAAATCCCCACGCGGTACTTCTTTCGACT
CGTCAAAAAGATAAATTAGCCTTGGCTGAGGAAATGAAACGTCATTATAATGGCAAAATAGATGTGGGCGTTTGGGGTGG
TCCAAATGGAATTTTAGAAGTCGTCCCTAAAGGAATCTCTAAAGCTTCAGGCCTTAATCACCTTCTTAAAGTTCTTGATA
TCCCGCTAGAAAATCTTATTGCTTTTGGTGATGAACATAATGATATTGAGATGTTTAAACTTGCACCTCAAGCCTATGCT
ATGAAAAATGCTTCTGCTAGACTAACTCCTTACGCCAGTGAAATTCTTCCTTGGACAAATGATGAGGATGGGGTGGCTAG
ACAACTCGAAAAACTCTTTTTAACCCCCAATAAATGA

Upstream 100 bases:

>100_bases
GCCCTTTCTTGTTCGTAGAACTTGGGTAATTCCTTTCCAGCTTATATCTATGTTATAATGAATAAATTGATAACTAAATT
TTAGACTAAGGGGAGTTTGA

Downstream 100 bases:

>100_bases
TGCTTATACCAGTCTCTGACTGGTATTTTTTTTAATCTATCCCAATAAACAACAGTCTGTCAAATTCTTTTGACAGCTCC
ATTTTTTGAAAATCTAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MENYKERKLIAIDLDGTTLQSDGRSISRYTKYIFKQVESLGHIICITTGRPFRMSLDVYRELELTSPVINFNGALISMPN
DKNWEHTKSYYIDRSFIFDLLRHQQNFNLHFFAVEYRRKFFLNTFRNVEPKLFGVEKFQPYNRLRADRVTENPHAVLLST
RQKDKLALAEEMKRHYNGKIDVGVWGGPNGILEVVPKGISKASGLNHLLKVLDIPLENLIAFGDEHNDIEMFKLAPQAYA
MKNASARLTPYASEILPWTNDEDGVARQLEKLFLTPNK

Sequences:

>Translated_278_residues
MENYKERKLIAIDLDGTTLQSDGRSISRYTKYIFKQVESLGHIICITTGRPFRMSLDVYRELELTSPVINFNGALISMPN
DKNWEHTKSYYIDRSFIFDLLRHQQNFNLHFFAVEYRRKFFLNTFRNVEPKLFGVEKFQPYNRLRADRVTENPHAVLLST
RQKDKLALAEEMKRHYNGKIDVGVWGGPNGILEVVPKGISKASGLNHLLKVLDIPLENLIAFGDEHNDIEMFKLAPQAYA
MKNASARLTPYASEILPWTNDEDGVARQLEKLFLTPNK
>Mature_278_residues
MENYKERKLIAIDLDGTTLQSDGRSISRYTKYIFKQVESLGHIICITTGRPFRMSLDVYRELELTSPVINFNGALISMPN
DKNWEHTKSYYIDRSFIFDLLRHQQNFNLHFFAVEYRRKFFLNTFRNVEPKLFGVEKFQPYNRLRADRVTENPHAVLLST
RQKDKLALAEEMKRHYNGKIDVGVWGGPNGILEVVPKGISKASGLNHLLKVLDIPLENLIAFGDEHNDIEMFKLAPQAYA
MKNASARLTPYASEILPWTNDEDGVARQLEKLFLTPNK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=282, Percent_Identity=29.7872340425532, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI48994981, Length=271, Percent_Identity=28.4132841328413, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787043, Length=253, Percent_Identity=24.901185770751, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 32183; Mature: 32183

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENYKERKLIAIDLDGTTLQSDGRSISRYTKYIFKQVESLGHIICITTGRPFRMSLDVYR
CCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHH
ELELTSPVINFNGALISMPNDKNWEHTKSYYIDRSFIFDLLRHQQNFNLHFFAVEYRRKF
HHHHCCCEEECCCEEEECCCCCCCCHHHHHEECHHHHHHHHHCCCCCCEEEEEHHHHHHH
FLNTFRNVEPKLFGVEKFQPYNRLRADRVTENPHAVLLSTRQKDKLALAEEMKRHYNGKI
HHHHHCCCCCCEECHHHCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
DVGVWGGPNGILEVVPKGISKASGLNHLLKVLDIPLENLIAFGDEHNDIEMFKLAPQAYA
EEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCHHHH
MKNASARLTPYASEILPWTNDEDGVARQLEKLFLTPNK
HCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MENYKERKLIAIDLDGTTLQSDGRSISRYTKYIFKQVESLGHIICITTGRPFRMSLDVYR
CCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHH
ELELTSPVINFNGALISMPNDKNWEHTKSYYIDRSFIFDLLRHQQNFNLHFFAVEYRRKF
HHHHCCCEEECCCEEEECCCCCCCCHHHHHEECHHHHHHHHHCCCCCCEEEEEHHHHHHH
FLNTFRNVEPKLFGVEKFQPYNRLRADRVTENPHAVLLSTRQKDKLALAEEMKRHYNGKI
HHHHHCCCCCCEECHHHCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
DVGVWGGPNGILEVVPKGISKASGLNHLLKVLDIPLENLIAFGDEHNDIEMFKLAPQAYA
EEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCHHHH
MKNASARLTPYASEILPWTNDEDGVARQLEKLFLTPNK
HCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]