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The map label for this gene is lipO [H]

Identifier: 125624627

GI number: 125624627

Start: 1820036

End: 1821598

Strand: Reverse

Name: lipO [H]

Synonym: llmg_1838

Alternate gene names: 125624627

Gene position: 1821598-1820036 (Counterclockwise)

Preceding gene: 125624628

Following gene: 125624626

Centisome position: 72.01

GC content: 38.13

Gene sequence:

>1563_bases
ATGAAAAATCAAAAAATGGTTGTTGCAGCTGGAGCGGCTTCAATGCTCGCAGCACTTGCTTTACTTTCTGCTTGTGGAAA
CTCAAGCTCTAGTAAAGAGGGGAATTCAAGCAATAAAGATTTTACAGTTGCAACAGTTCGTTGGGCTGATTGGGGGAATG
ATTATACTAAATTTCCAAATCAGTTAGCAAAAGAAGCTGGAATTAATGTGAAGTGGGATACTTATCTCAATGCGGATTGG
GGAGATAAGAAGTCAACATTGATGGCAGGAGGGAATTTACCAGATACTTTTATGGGTTCAATCACCTTTACAGACCAAGA
AATTGCTCAAAATCAGTCTAATTTCATTCCCTTGGAAAAATATGTCAAGGATATACCTAATTTGCAAAAGGCAATGAAGA
AGAATCCGGCTTTAAAAGCCATGATTACAAGTCCGGATGGTCATATTTGGTCTTTACCTAAAGAAGCCCCAATGCGTCCA
ATCATTGCGAATCAATTATTTATCAACAAAGCTTGGCTGGATAAGCTGGGCTTACAAATGCCAACAACTTATGACGAATT
TGTGAAAGTTTTGGAAGCTTTTAAAACTAAAGACCCTAATGGCAATGGGAAGGCAGATGAAATTCCTTATGGAACAGGCA
ATTTTGACCCCACTATGTCTTACACCTTACCCTTTGGTGTTCTAAGAGGAGCTGATAATTCAAATGAAATGATGATGTTG
AATGGAAAACCAGCTTATATCCGCTCGACTGATAATTTCAAAAAAGGGATTGAGGCCATGAATGATGCCTATACGAAAGG
GTTGATTGACCCAGAATTGTACACGCTAGACCCTACGCAAGCACAAGCAAAATTAATGGCCGATACTGAAACAGTTGGTG
TGTCAGTTGGTTGGACAGCTGATGCAACTTTTGGGAAAAATGCTAAAGATTATGTTGCCTTGCCTGCATTAAAAGGCCCT
GATGGAAATCAATATGTGATGTCTGACCCTGACCATTTTAACCAAGGGCGAGATGAATTTATGGTAACGACTCATGCTAA
AAATGTAAAAGCACTGATAAAGTGGGCTGATAAATTTTATACTAACGATGCAGCCATTCAAAATTATTATGGAGCATTTG
GAGTTGGGACTGAAAAATCAGGTGAGGCTTACAAAGTTTTAAAACCAACTGGGAATAACTCAGCAGACACTCAAGCTTGG
ATAAATTCCTTGCGAGATTTTGGGCCTAAATCATGGGATAACAGTTTGAATGATAAGGTTACTTTTGAAGACCCTAACAA
TGGTGATGCTCAGAAATTAAAAATGGATGCAGAGTTGAAACAATATGCTCGACCTGCCTTTCCTTCGGTTACTTATACAA
ATGATGAATTACAAAAAATTGCTCAAGTTTATCCAGATTTGAGTTCGTACACAACACAAGAAACAGCAAAATGGGTTACT
AAAGGTGGGATTGATAAGGATTGGGAGGCTTATATTGCAAAATTAAATCAAATGGGCCTAAAAGACTATTTGAAAATACA
AACGGACGCTTATGAACGTTACCAAAAAGCTTTGAAAAAATAG

Upstream 100 bases:

>100_bases
TTAATCAAGGTGTCATGGTTGGAGCGATTAAAGAGTAAGTTATTAGATTGAATTAGGAATTAATTAGTAATTTTAAAATT
AAATTATAGGAGATTTTCAA

Downstream 100 bases:

>100_bases
CTTGTTATAAAAGACCAGAGGTCTAAAAACCTCTGGTCTATTATTAAAAGTGGCGGACAGCTTATCAGTAAAAAAGGATG
AATAAGATGGGAAAACTATT

Product: putative sugar ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Lipoprotein lplA [H]

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MKNQKMVVAAGAASMLAALALLSACGNSSSSKEGNSSNKDFTVATVRWADWGNDYTKFPNQLAKEAGINVKWDTYLNADW
GDKKSTLMAGGNLPDTFMGSITFTDQEIAQNQSNFIPLEKYVKDIPNLQKAMKKNPALKAMITSPDGHIWSLPKEAPMRP
IIANQLFINKAWLDKLGLQMPTTYDEFVKVLEAFKTKDPNGNGKADEIPYGTGNFDPTMSYTLPFGVLRGADNSNEMMML
NGKPAYIRSTDNFKKGIEAMNDAYTKGLIDPELYTLDPTQAQAKLMADTETVGVSVGWTADATFGKNAKDYVALPALKGP
DGNQYVMSDPDHFNQGRDEFMVTTHAKNVKALIKWADKFYTNDAAIQNYYGAFGVGTEKSGEAYKVLKPTGNNSADTQAW
INSLRDFGPKSWDNSLNDKVTFEDPNNGDAQKLKMDAELKQYARPAFPSVTYTNDELQKIAQVYPDLSSYTTQETAKWVT
KGGIDKDWEAYIAKLNQMGLKDYLKIQTDAYERYQKALKK

Sequences:

>Translated_520_residues
MKNQKMVVAAGAASMLAALALLSACGNSSSSKEGNSSNKDFTVATVRWADWGNDYTKFPNQLAKEAGINVKWDTYLNADW
GDKKSTLMAGGNLPDTFMGSITFTDQEIAQNQSNFIPLEKYVKDIPNLQKAMKKNPALKAMITSPDGHIWSLPKEAPMRP
IIANQLFINKAWLDKLGLQMPTTYDEFVKVLEAFKTKDPNGNGKADEIPYGTGNFDPTMSYTLPFGVLRGADNSNEMMML
NGKPAYIRSTDNFKKGIEAMNDAYTKGLIDPELYTLDPTQAQAKLMADTETVGVSVGWTADATFGKNAKDYVALPALKGP
DGNQYVMSDPDHFNQGRDEFMVTTHAKNVKALIKWADKFYTNDAAIQNYYGAFGVGTEKSGEAYKVLKPTGNNSADTQAW
INSLRDFGPKSWDNSLNDKVTFEDPNNGDAQKLKMDAELKQYARPAFPSVTYTNDELQKIAQVYPDLSSYTTQETAKWVT
KGGIDKDWEAYIAKLNQMGLKDYLKIQTDAYERYQKALKK
>Mature_520_residues
MKNQKMVVAAGAASMLAALALLSACGNSSSSKEGNSSNKDFTVATVRWADWGNDYTKFPNQLAKEAGINVKWDTYLNADW
GDKKSTLMAGGNLPDTFMGSITFTDQEIAQNQSNFIPLEKYVKDIPNLQKAMKKNPALKAMITSPDGHIWSLPKEAPMRP
IIANQLFINKAWLDKLGLQMPTTYDEFVKVLEAFKTKDPNGNGKADEIPYGTGNFDPTMSYTLPFGVLRGADNSNEMMML
NGKPAYIRSTDNFKKGIEAMNDAYTKGLIDPELYTLDPTQAQAKLMADTETVGVSVGWTADATFGKNAKDYVALPALKGP
DGNQYVMSDPDHFNQGRDEFMVTTHAKNVKALIKWADKFYTNDAAIQNYYGAFGVGTEKSGEAYKVLKPTGNNSADTQAW
INSLRDFGPKSWDNSLNDKVTFEDPNNGDAQKLKMDAELKQYARPAFPSVTYTNDELQKIAQVYPDLSSYTTQETAKWVT
KGGIDKDWEAYIAKLNQMGLKDYLKIQTDAYERYQKALKK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 57703; Mature: 57703

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQKMVVAAGAASMLAALALLSACGNSSSSKEGNSSNKDFTVATVRWADWGNDYTKFPN
CCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
QLAKEAGINVKWDTYLNADWGDKKSTLMAGGNLPDTFMGSITFTDQEIAQNQSNFIPLEK
HHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCCHHHCCCEEECHHHHHCCCCCCCCHHH
YVKDIPNLQKAMKKNPALKAMITSPDGHIWSLPKEAPMRPIIANQLFINKAWLDKLGLQM
HHHHCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PTTYDEFVKVLEAFKTKDPNGNGKADEIPYGTGNFDPTMSYTLPFGVLRGADNSNEMMML
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHEECCCCCCCEEEE
NGKPAYIRSTDNFKKGIEAMNDAYTKGLIDPELYTLDPTQAQAKLMADTETVGVSVGWTA
CCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCEEEEEECCCC
DATFGKNAKDYVALPALKGPDGNQYVMSDPDHFNQGRDEFMVTTHAKNVKALIKWADKFY
CCCCCCCCCCEEEECCEECCCCCEEEECCCHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
TNDAAIQNYYGAFGVGTEKSGEAYKVLKPTGNNSADTQAWINSLRDFGPKSWDNSLNDKV
CCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCE
TFEDPNNGDAQKLKMDAELKQYARPAFPSVTYTNDELQKIAQVYPDLSSYTTQETAKWVT
EECCCCCCCHHHEEEHHHHHHHCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHH
KGGIDKDWEAYIAKLNQMGLKDYLKIQTDAYERYQKALKK
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNQKMVVAAGAASMLAALALLSACGNSSSSKEGNSSNKDFTVATVRWADWGNDYTKFPN
CCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
QLAKEAGINVKWDTYLNADWGDKKSTLMAGGNLPDTFMGSITFTDQEIAQNQSNFIPLEK
HHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCCHHHCCCEEECHHHHHCCCCCCCCHHH
YVKDIPNLQKAMKKNPALKAMITSPDGHIWSLPKEAPMRPIIANQLFINKAWLDKLGLQM
HHHHCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PTTYDEFVKVLEAFKTKDPNGNGKADEIPYGTGNFDPTMSYTLPFGVLRGADNSNEMMML
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHEECCCCCCCEEEE
NGKPAYIRSTDNFKKGIEAMNDAYTKGLIDPELYTLDPTQAQAKLMADTETVGVSVGWTA
CCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCEEEEEECCCC
DATFGKNAKDYVALPALKGPDGNQYVMSDPDHFNQGRDEFMVTTHAKNVKALIKWADKFY
CCCCCCCCCCEEEECCEECCCCCEEEECCCHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
TNDAAIQNYYGAFGVGTEKSGEAYKVLKPTGNNSADTQAWINSLRDFGPKSWDNSLNDKV
CCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCE
TFEDPNNGDAQKLKMDAELKQYARPAFPSVTYTNDELQKIAQVYPDLSSYTTQETAKWVT
EECCCCCCCHHHEEEHHHHHHHCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHH
KGGIDKDWEAYIAKLNQMGLKDYLKIQTDAYERYQKALKK
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7921237; 9384377 [H]