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The map label for this gene is lplC [H]

Identifier: 125624628

GI number: 125624628

Start: 1821661

End: 1822275

Strand: Reverse

Name: lplC [H]

Synonym: llmg_1839

Alternate gene names: 125624628

Gene position: 1822275-1821661 (Counterclockwise)

Preceding gene: 125624629

Following gene: 125624627

Centisome position: 72.04

GC content: 37.4

Gene sequence:

>615_bases
TTGGTTAATATCCCTGTCGGTTATGCCTTATCACGAAGAGATTTATTTGGAAGAAAATGGATTTCGCTACTCTATGTTGT
TCCTATGTTTGTGACAGGAGGATTGATTCCAATTTATTTGGTGACCAAAAATTTTGGACTCTTGAATACGGTTTGGGTCA
TGATTGTTCCCTTTGCGGTTTCCCCTTATAATATTATCGTTGCTCGGACCTTTTTTCAGGAGTCTATTCCAAATGGTCTT
TGGGAAGCTGCTCAAGTTGATGGCTCGAGTACCTTTAGATATTTTTTCCAAATTGTTCTTCCTTTGTCAAAAGCGATTTT
GGCAGTTATCGGTCTTTGGACAGCAGTCGGAATTTGGAACTCATGGTTCAATGCTTTGATTTATCTTACTGACCAAAATC
TGCAACCCTTGCAATTAATATTAAGACAATTATTGATTACAAACCAAACGCTCCAAAGTCAAGCTACTGGTGACGTAGCC
TCACAACTTCGTCAAACTGCTGATATGATGAAATATGCAGCTATTGTTGTTTCTACACTCCCAATTATGATGGTTTATCC
TTTCTTACAAAAATATTTTAATCAAGGTGTCATGGTTGGAGCGATTAAAGAGTAA

Upstream 100 bases:

>100_bases
GAGTTTAGAGGGCTATAAAACCCTATTTGCTCAGCCCTTAATTTGGCGTTCCTATTTTAATACTATTTTATATACAGTTG
CAGGGACAGCATTTGGGTTA

Downstream 100 bases:

>100_bases
GTTATTAGATTGAATTAGGAATTAATTAGTAATTTTAAAATTAAATTATAGGAGATTTTCAAATGAAAAATCAAAAAATG
GTTGTTGCAGCTGGAGCGGC

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MVNIPVGYALSRRDLFGRKWISLLYVVPMFVTGGLIPIYLVTKNFGLLNTVWVMIVPFAVSPYNIIVARTFFQESIPNGL
WEAAQVDGSSTFRYFFQIVLPLSKAILAVIGLWTAVGIWNSWFNALIYLTDQNLQPLQLILRQLLITNQTLQSQATGDVA
SQLRQTADMMKYAAIVVSTLPIMMVYPFLQKYFNQGVMVGAIKE

Sequences:

>Translated_204_residues
MVNIPVGYALSRRDLFGRKWISLLYVVPMFVTGGLIPIYLVTKNFGLLNTVWVMIVPFAVSPYNIIVARTFFQESIPNGL
WEAAQVDGSSTFRYFFQIVLPLSKAILAVIGLWTAVGIWNSWFNALIYLTDQNLQPLQLILRQLLITNQTLQSQATGDVA
SQLRQTADMMKYAAIVVSTLPIMMVYPFLQKYFNQGVMVGAIKE
>Mature_204_residues
MVNIPVGYALSRRDLFGRKWISLLYVVPMFVTGGLIPIYLVTKNFGLLNTVWVMIVPFAVSPYNIIVARTFFQESIPNGL
WEAAQVDGSSTFRYFFQIVLPLSKAILAVIGLWTAVGIWNSWFNALIYLTDQNLQPLQLILRQLLITNQTLQSQATGDVA
SQLRQTADMMKYAAIVVSTLPIMMVYPFLQKYFNQGVMVGAIKE

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23021; Mature: 23021

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNIPVGYALSRRDLFGRKWISLLYVVPMFVTGGLIPIYLVTKNFGLLNTVWVMIVPFAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCC
SPYNIIVARTFFQESIPNGLWEAAQVDGSSTFRYFFQIVLPLSKAILAVIGLWTAVGIWN
CCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWFNALIYLTDQNLQPLQLILRQLLITNQTLQSQATGDVASQLRQTADMMKYAAIVVSTL
HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PIMMVYPFLQKYFNQGVMVGAIKE
HHHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MVNIPVGYALSRRDLFGRKWISLLYVVPMFVTGGLIPIYLVTKNFGLLNTVWVMIVPFAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCC
SPYNIIVARTFFQESIPNGLWEAAQVDGSSTFRYFFQIVLPLSKAILAVIGLWTAVGIWN
CCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWFNALIYLTDQNLQPLQLILRQLLITNQTLQSQATGDVASQLRQTADMMKYAAIVVSTL
HHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PIMMVYPFLQKYFNQGVMVGAIKE
HHHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]