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The map label for this gene is hslB [H]

Identifier: 125624460

GI number: 125624460

Start: 1638267

End: 1638572

Strand: Reverse

Name: hslB [H]

Synonym: llmg_1661

Alternate gene names: 125624460

Gene position: 1638572-1638267 (Counterclockwise)

Preceding gene: 125624461

Following gene: 125624458

Centisome position: 64.78

GC content: 33.66

Gene sequence:

>306_bases
GTGAATGCAGCTAAAGCAATTAATGCTTTTGTTGAGGCGATTACTTACTATATTTCCGAAGGGGCAACCGTACATATTTC
AAATTTTGGTACTTTTGAAGTTCGCAAACGTGCAGCCAGAATTAGTCATGATGTACATTCGCGCGAAAAAATTTTAGTAG
GTGAACAAAATATTCCCGTTTTTAGAGCAGGTAAGGCTTTAAAATTAGCTACAAAACAAGAAATATCTGATGAGGATAAG
CTTGTTGAACAATTAAATAATATTATTTTGGGAGTTCAACACCAAGATAAAATTGACAACTATTAG

Upstream 100 bases:

>100_bases
TAAAAGAATATAAAGGACAAAAATAATAAGGAGGAATTAATAAATAGCGTCAAAACAGGAGTTAATTGATTATGTAGCAG
ATCGTACGGAACTTTCAAAG

Downstream 100 bases:

>100_bases
TGTGCTATTTATTTTTGATTATTAATATTAAAAAACGCTTCTCTTAAAGAGAGGCGTTTTGTTAATTAATGAGTTCTATA
AGTAAATCAGCTATTTGAGT

Product: HU-like DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNAAKAINAFVEAITYYISEGATVHISNFGTFEVRKRAARISHDVHSREKILVGEQNIPVFRAGKALKLATKQEISDEDK
LVEQLNNIILGVQHQDKIDNY

Sequences:

>Translated_101_residues
MNAAKAINAFVEAITYYISEGATVHISNFGTFEVRKRAARISHDVHSREKILVGEQNIPVFRAGKALKLATKQEISDEDK
LVEQLNNIILGVQHQDKIDNY
>Mature_101_residues
MNAAKAINAFVEAITYYISEGATVHISNFGTFEVRKRAARISHDVHSREKILVGEQNIPVFRAGKALKLATKQEISDEDK
LVEQLNNIILGVQHQDKIDNY

Specific function: Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

None

Paralogues:

None

Copy number: 860 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). 2040 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR020816
- InterPro:   IPR010992 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 11351; Mature: 11351

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAKAINAFVEAITYYISEGATVHISNFGTFEVRKRAARISHDVHSREKILVGEQNIPV
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCE
FRAGKALKLATKQEISDEDKLVEQLNNIILGVQHQDKIDNY
EECCCEEEEHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCC
>Mature Secondary Structure
MNAAKAINAFVEAITYYISEGATVHISNFGTFEVRKRAARISHDVHSREKILVGEQNIPV
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCE
FRAGKALKLATKQEISDEDKLVEQLNNIILGVQHQDKIDNY
EECCCEEEEHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]