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The map label for this gene is ypiA [H]

Identifier: 125624131

GI number: 125624131

Start: 1281759

End: 1283015

Strand: Reverse

Name: ypiA [H]

Synonym: llmg_1310

Alternate gene names: 125624131

Gene position: 1283015-1281759 (Counterclockwise)

Preceding gene: 125624132

Following gene: 125624130

Centisome position: 50.72

GC content: 32.62

Gene sequence:

>1257_bases
ATGTCATATTCAGAAGATACAATTGACTTTTTACATCAGGGAGACCTGATTGGAATGCAAAATTCACTTGCAAAAGCATT
AAAAAATGATAATAATGAAATGTTGGCGGACCTTGCCGAATATCTGCAAATGATGGGTTTTATTGATGAAAGTCAAAAAA
TTTATGACCAAATCATGTCTGAACACCCAGAGTCAACGGATTATCTGATTAATTTAGCAGAGATAGCTGAAGATAATGGT
AATTTAGATGAAGCTCTGAACTATCTTTATCAAATTCCAGTAGACGATGAAAACTATATTGCTGCACTCGTTAAAATTGC
TGATTTATATCAGTATGAAGGTGATTTTGAAACAGCAATTTCAAAATTAGAAGAGGCACGAGAATTATCAGATTCTCCGC
TTATCACCTTTGCTTTGGCTGAATCTTATTTTGAACAAGGTGATTATTCAGCCGCAATTACAGAGTATGCCAAACTTTCA
GAACGTAAAATTTTGCATGAAACAAAAATATCTATTTACCAAAGAATTGGCGATTCTTATGCTCAATTAGGTAATTTTGA
GAATGCCATTTCATTTCTTGAAAAATCATTTGAATTTGATGAAAAACCTGAAACTTTATATAAAATCGCTCTTCTTTATG
GAGAAATTCATAACGAAACAAGAGCTATTGCTAATTTCAAACGATTAGAGAAAATGGATGTTGAATTCTTGAACTATGAG
TTAGCTTATGCTCAAACATTGGAAGCCAATCAAGAATTTGAAGCTGCACTAGAAATGGCGCAGAAAGGTTTGAATAAAAA
TCCAAATGCCGTTCCTTTACTTCATTTCGCCTCAAAAATTAGTTTCAAATTAAAAGATAAAGCAGCAGCAGAACGTTACC
TCATGGATGCCTTGAACTTACCAGAGTTACATGATGAAACTGTCTTTCTACTTGCTAACTTGTACTTTAATGAAGAAGAT
TTTGAAGCGGTCATTAATCTTGAAGAACTTTTAGAAGATGAACATTTATTAGCTAAATGGCTTTTTGCAGGAGCACATAA
AGCTTTAGAAAATGATTCTGAAGCGACTGCTCTGTATGAAGAACTCATCCAAACCAACTTGTCAGAGAATCCAGAGTTTT
TAGAAGACTATATTGATTTTCTTAAAGAAATTGGTCAAATTTCTAAAACAGAACCAATTATTGAACAATATTTGGAACTC
GTTCCAGATGATGAAAATATGAGAAATTTGCTGACAGACTTAAAAAATAATTACTGA

Upstream 100 bases:

>100_bases
CGTTTATGAATGGTATCGTGAAATTTCAGTCCTTTATCGTGAAGAAACAGCTACAGAAGAAGCTAAAGAGTAATTAATAG
AATAAAAAATAAGGAGAAAA

Downstream 100 bases:

>100_bases
CAAAGCTGTCAGTAATTATTTTTATTGTAAGCTAGAAAATTCACAAACTTGCGTCAAAATAATTGTAAAAGGGTCTATTA
TCTGATAAAATGATTGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSYSEDTIDFLHQGDLIGMQNSLAKALKNDNNEMLADLAEYLQMMGFIDESQKIYDQIMSEHPESTDYLINLAEIAEDNG
NLDEALNYLYQIPVDDENYIAALVKIADLYQYEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLS
ERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSFEFDEKPETLYKIALLYGEIHNETRAIANFKRLEKMDVEFLNYE
LAYAQTLEANQEFEAALEMAQKGLNKNPNAVPLLHFASKISFKLKDKAAAERYLMDALNLPELHDETVFLLANLYFNEED
FEAVINLEELLEDEHLLAKWLFAGAHKALENDSEATALYEELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLEL
VPDDENMRNLLTDLKNNY

Sequences:

>Translated_418_residues
MSYSEDTIDFLHQGDLIGMQNSLAKALKNDNNEMLADLAEYLQMMGFIDESQKIYDQIMSEHPESTDYLINLAEIAEDNG
NLDEALNYLYQIPVDDENYIAALVKIADLYQYEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLS
ERKILHETKISIYQRIGDSYAQLGNFENAISFLEKSFEFDEKPETLYKIALLYGEIHNETRAIANFKRLEKMDVEFLNYE
LAYAQTLEANQEFEAALEMAQKGLNKNPNAVPLLHFASKISFKLKDKAAAERYLMDALNLPELHDETVFLLANLYFNEED
FEAVINLEELLEDEHLLAKWLFAGAHKALENDSEATALYEELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLEL
VPDDENMRNLLTDLKNNY
>Mature_417_residues
SYSEDTIDFLHQGDLIGMQNSLAKALKNDNNEMLADLAEYLQMMGFIDESQKIYDQIMSEHPESTDYLINLAEIAEDNGN
LDEALNYLYQIPVDDENYIAALVKIADLYQYEGDFETAISKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSE
RKILHETKISIYQRIGDSYAQLGNFENAISFLEKSFEFDEKPETLYKIALLYGEIHNETRAIANFKRLEKMDVEFLNYEL
AYAQTLEANQEFEAALEMAQKGLNKNPNAVPLLHFASKISFKLKDKAAAERYLMDALNLPELHDETVFLLANLYFNEEDF
EAVINLEELLEDEHLLAKWLFAGAHKALENDSEATALYEELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELV
PDDENMRNLLTDLKNNY

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 48109; Mature: 47978

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSEDTIDFLHQGDLIGMQNSLAKALKNDNNEMLADLAEYLQMMGFIDESQKIYDQIMS
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHPESTDYLINLAEIAEDNGNLDEALNYLYQIPVDDENYIAALVKIADLYQYEGDFETAI
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH
SKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSY
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLGNFENAISFLEKSFEFDEKPETLYKIALLYGEIHNETRAIANFKRLEKMDVEFLNYE
HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYAQTLEANQEFEAALEMAQKGLNKNPNAVPLLHFASKISFKLKDKAAAERYLMDALNL
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PELHDETVFLLANLYFNEEDFEAVINLEELLEDEHLLAKWLFAGAHKALENDSEATALYE
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDLKNNY
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYSEDTIDFLHQGDLIGMQNSLAKALKNDNNEMLADLAEYLQMMGFIDESQKIYDQIMS
CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHPESTDYLINLAEIAEDNGNLDEALNYLYQIPVDDENYIAALVKIADLYQYEGDFETAI
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH
SKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETKISIYQRIGDSY
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLGNFENAISFLEKSFEFDEKPETLYKIALLYGEIHNETRAIANFKRLEKMDVEFLNYE
HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYAQTLEANQEFEAALEMAQKGLNKNPNAVPLLHFASKISFKLKDKAAAERYLMDALNL
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PELHDETVFLLANLYFNEEDFEAVINLEELLEDEHLLAKWLFAGAHKALENDSEATALYE
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ELIQTNLSENPEFLEDYIDFLKEIGQISKTEPIIEQYLELVPDDENMRNLLTDLKNNY
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]