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The map label for this gene is rmaE

Identifier: 125623854

GI number: 125623854

Start: 983847

End: 984266

Strand: Direct

Name: rmaE

Synonym: llmg_1017

Alternate gene names: NA

Gene position: 983847-984266 (Clockwise)

Preceding gene: 125623851

Following gene: 125623856

Centisome position: 38.9

GC content: 30.24

Gene sequence:

>420_bases
ATGGCCAATACAATTTATTCCAATTTAATTCGTTCTATCTCACAAAAATCAATGATGGCTTCTAGTCAAATGATGAAAGA
TTTAGAAGTTAATCATCAACAAGCTAGGGTCATCGCTTATATTGCAGAGAACCAAGATAAGGGCTTAATTCAAAAAGATT
TAGCAGAGGTATTCAATAGACGAGGAGCAAGTATTACAAGTATGCTCCAAGGCTTGGAAAAAAAAGGATATATCGAACGA
CGAATTCCTAAAGATAATGAACGTAAAAAAAATATCTATATTTTACCCAAAGGACTTAAAATTATTAATCAAATTAATCA
AATATTTGAAGCCTCTGAAAGTAAATTGATTGGTGCTTTGACTGAGAAAGAACAAGCTGAATTCTTAAGGCTTTTAGAAA
AAATAGATAATAACTTATAA

Upstream 100 bases:

>100_bases
AAGAACTAACTATTAGAAGCCTAATTGTTTTGAATTGACAATTAGATAAAAGACCATTATACTAAGAGTTAAGAACTAGT
AAATAAAAAAGGAGACCAGA

Downstream 100 bases:

>100_bases
GAAATAAAAAAAGACTAACTTAATGATTAGTCTTTTTTTATTTCAGCACAAATGTGTTTCTCAAAAAATATTATAGACTT
TCTTTAAAAAAGATTACAGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator MarR/EmrR Family; Regulatory Proteins

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MANTIYSNLIRSISQKSMMASSQMMKDLEVNHQQARVIAYIAENQDKGLIQKDLAEVFNRRGASITSMLQGLEKKGYIER
RIPKDNERKKNIYILPKGLKIINQINQIFEASESKLIGALTEKEQAEFLRLLEKIDNNL

Sequences:

>Translated_139_residues
MANTIYSNLIRSISQKSMMASSQMMKDLEVNHQQARVIAYIAENQDKGLIQKDLAEVFNRRGASITSMLQGLEKKGYIER
RIPKDNERKKNIYILPKGLKIINQINQIFEASESKLIGALTEKEQAEFLRLLEKIDNNL
>Mature_138_residues
ANTIYSNLIRSISQKSMMASSQMMKDLEVNHQQARVIAYIAENQDKGLIQKDLAEVFNRRGASITSMLQGLEKKGYIERR
IPKDNERKKNIYILPKGLKIINQINQIFEASESKLIGALTEKEQAEFLRLLEKIDNNL

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15969; Mature: 15838

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTIYSNLIRSISQKSMMASSQMMKDLEVNHQQARVIAYIAENQDKGLIQKDLAEVFNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
RGASITSMLQGLEKKGYIERRIPKDNERKKNIYILPKGLKIINQINQIFEASESKLIGAL
CCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
TEKEQAEFLRLLEKIDNNL
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANTIYSNLIRSISQKSMMASSQMMKDLEVNHQQARVIAYIAENQDKGLIQKDLAEVFNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
RGASITSMLQGLEKKGYIERRIPKDNERKKNIYILPKGLKIINQINQIFEASESKLIGAL
CCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
TEKEQAEFLRLLEKIDNNL
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA