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The map label for this gene is rmeB [C]

Identifier: 125623856

GI number: 125623856

Start: 987245

End: 987679

Strand: Direct

Name: rmeB [C]

Synonym: llmg_1020

Alternate gene names: 125623856

Gene position: 987245-987679 (Clockwise)

Preceding gene: 125623854

Following gene: 125623859

Centisome position: 39.03

GC content: 35.17

Gene sequence:

>435_bases
ATGACAAAATATACAATTGGTGATATTTCACGTAAATTGAATGTTTCTAATGATGCTGTACGTTATTATGATAAAGAAGG
TTTGCTGCCATTTGCCAAGCGAAATAAAGCTGGACGAAGGGAATTCACCGACGATGACCTTGGTTATATTGAAGTGATTG
ATTGTCTAAAAAAATCAGGAATTCCGATTAAGGATATCGCCCAATTTATTGATTGGTGTATGGAGGGGGACTCCACACTT
GATGAACGTTTAGACTTCATGGAAACCCATGAAGAGCAACTTGAAGAAAAAATAAAAGTTTTAGAAATGAATTTGGCCTT
TTTAAGATGGAAAATCTGGTATTATCAAACAGCAGCAGAAGCAGGAACTGAAAGTATTCATTTCATCCCTGGAACAACGC
AAGTTAAACCAGAAATAAGAGACATTTTCAAATAA

Upstream 100 bases:

>100_bases
TATAACAATAAGTGGTTTAGACATTTTATTTCTCCTTAAGAGTATTTTTTTGATATACTGATTATACAACATGGAGTTAA
CTCCATGTCAAGGAGAAAGA

Downstream 100 bases:

>100_bases
GATAAATAAAAGACAAAGAGTAATTAATATACTCTTTGTCTTTTATTTTTTCTTCGTTGGAAAATTAATAAGGAATAAGG
ATAAAAAGACGACTACTATT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTKYTIGDISRKLNVSNDAVRYYDKEGLLPFAKRNKAGRREFTDDDLGYIEVIDCLKKSGIPIKDIAQFIDWCMEGDSTL
DERLDFMETHEEQLEEKIKVLEMNLAFLRWKIWYYQTAAEAGTESIHFIPGTTQVKPEIRDIFK

Sequences:

>Translated_144_residues
MTKYTIGDISRKLNVSNDAVRYYDKEGLLPFAKRNKAGRREFTDDDLGYIEVIDCLKKSGIPIKDIAQFIDWCMEGDSTL
DERLDFMETHEEQLEEKIKVLEMNLAFLRWKIWYYQTAAEAGTESIHFIPGTTQVKPEIRDIFK
>Mature_143_residues
TKYTIGDISRKLNVSNDAVRYYDKEGLLPFAKRNKAGRREFTDDDLGYIEVIDCLKKSGIPIKDIAQFIDWCMEGDSTLD
ERLDFMETHEEQLEEKIKVLEMNLAFLRWKIWYYQTAAEAGTESIHFIPGTTQVKPEIRDIFK

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16863; Mature: 16732

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYTIGDISRKLNVSNDAVRYYDKEGLLPFAKRNKAGRREFTDDDLGYIEVIDCLKKSG
CCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCC
IPIKDIAQFIDWCMEGDSTLDERLDFMETHEEQLEEKIKVLEMNLAFLRWKIWYYQTAAE
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGTESIHFIPGTTQVKPEIRDIFK
CCCCCEEECCCCCCCCHHHHHHCC
>Mature Secondary Structure 
TKYTIGDISRKLNVSNDAVRYYDKEGLLPFAKRNKAGRREFTDDDLGYIEVIDCLKKSG
CCCCHHHHHHHCCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCC
IPIKDIAQFIDWCMEGDSTLDERLDFMETHEEQLEEKIKVLEMNLAFLRWKIWYYQTAAE
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGTESIHFIPGTTQVKPEIRDIFK
CCCCCEEECCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]