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The map label for this gene is lplB [H]

Identifier: 125623846

GI number: 125623846

Start: 974516

End: 975406

Strand: Direct

Name: lplB [H]

Synonym: llmg_1009

Alternate gene names: 125623846

Gene position: 974516-975406 (Clockwise)

Preceding gene: 125623845

Following gene: 125623847

Centisome position: 38.53

GC content: 36.03

Gene sequence:

>891_bases
ATGAAATCTATTAAAAAATATTGGCAGCTATATTTAATTGTGGCTATCCCAACAGTCTATCTTTTAGTTTTTCGCTATAT
TCCGATGCTTGGAAATGTGATTGCTTTTAGAACTTATTTACCGGGAGGTTCTGTCTTTGGACAGGATTGGGTTGGACTTC
GATATTTCCAGATGTTTATTGGAGATGCAACCTTTTGGCAAGTTTTTCTTAATACACTTTCTATTGGGATTTGGACATTG
ATTTTTACCTTCCCCTTACCTATTATCTTCGCTCTTTTACTGAATGAAGTTAAAAACAGGATCTTTAAAAAATTCATTCA
AACAGCCTCTTATCTTCCCTATTTTTTATCAATTGTCATTATTGCGGGAATGATTTTAGATTTTACCTCAAGCAATGGTT
TTATTAATAACGCCATTCATTTCTTTGGTGGAACTCGTATTCTTTTTATGCAAGACCCGAAATGGTTCCAACCGATTTAT
GTCATTTCGCAAGTATGGCAAACCTTAGGTTGGGGTTCAATTCTGTATTTGGCAGCATTGACAAATATTGATGATACGCT
TTATGAAGCTGCTAAGATGGATGGAGCCAATCGTTGGCAACAAATGCTCCATGTCACCTTGCCCGGAATTTTACCCACAA
TTATCACGATGCTTGTTTTAAATGTTGGTTCTGTTTTAGGAGTTGGTTTTGAAAAAGTTCTCCTCCTTCAAAATCCGTTG
GTTTACTCAACAGGAGATGTTGTTTCAACTTACCTCTATCGAGTAGGGATACTTTCGTCAAACTTTTCTTATGCGACAGC
GATTGGTATTTTTGAAGCGATTATTGGTTTAGTTCTAGTACTGGGTTCTAACAGAATTTCTGCGAAGATTACCAAGACTT
CATTATGGTAA

Upstream 100 bases:

>100_bases
TGTAATAAATACAGGGATGAAAAAATAATTTATCTTTAGAAAATGAAAGTTTTGAACTAACCTAGAGATGATTCATCTCC
TTAGAAGGAAAATTTTTAAT

Downstream 100 bases:

>100_bases
GGAGGATAAAATGAAAGATAGTATCGGTTATAAAATTTTCAAAGTGATCAATGCAATTATTTTGATTTTGATTGTCATTG
CAACAGTCTACCCCTTTTGG

Product: sugar ABC transporter substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKSIKKYWQLYLIVAIPTVYLLVFRYIPMLGNVIAFRTYLPGGSVFGQDWVGLRYFQMFIGDATFWQVFLNTLSIGIWTL
IFTFPLPIIFALLLNEVKNRIFKKFIQTASYLPYFLSIVIIAGMILDFTSSNGFINNAIHFFGGTRILFMQDPKWFQPIY
VISQVWQTLGWGSILYLAALTNIDDTLYEAAKMDGANRWQQMLHVTLPGILPTIITMLVLNVGSVLGVGFEKVLLLQNPL
VYSTGDVVSTYLYRVGILSSNFSYATAIGIFEAIIGLVLVLGSNRISAKITKTSLW

Sequences:

>Translated_296_residues
MKSIKKYWQLYLIVAIPTVYLLVFRYIPMLGNVIAFRTYLPGGSVFGQDWVGLRYFQMFIGDATFWQVFLNTLSIGIWTL
IFTFPLPIIFALLLNEVKNRIFKKFIQTASYLPYFLSIVIIAGMILDFTSSNGFINNAIHFFGGTRILFMQDPKWFQPIY
VISQVWQTLGWGSILYLAALTNIDDTLYEAAKMDGANRWQQMLHVTLPGILPTIITMLVLNVGSVLGVGFEKVLLLQNPL
VYSTGDVVSTYLYRVGILSSNFSYATAIGIFEAIIGLVLVLGSNRISAKITKTSLW
>Mature_296_residues
MKSIKKYWQLYLIVAIPTVYLLVFRYIPMLGNVIAFRTYLPGGSVFGQDWVGLRYFQMFIGDATFWQVFLNTLSIGIWTL
IFTFPLPIIFALLLNEVKNRIFKKFIQTASYLPYFLSIVIIAGMILDFTSSNGFINNAIHFFGGTRILFMQDPKWFQPIY
VISQVWQTLGWGSILYLAALTNIDDTLYEAAKMDGANRWQQMLHVTLPGILPTIITMLVLNVGSVLGVGFEKVLLLQNPL
VYSTGDVVSTYLYRVGILSSNFSYATAIGIFEAIIGLVLVLGSNRISAKITKTSLW

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane. May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG4209

COG function: function code G; ABC-type polysaccharide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=271, Percent_Identity=26.5682656826568, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33469; Mature: 33469

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKKYWQLYLIVAIPTVYLLVFRYIPMLGNVIAFRTYLPGGSVFGQDWVGLRYFQMFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHH
GDATFWQVFLNTLSIGIWTLIFTFPLPIIFALLLNEVKNRIFKKFIQTASYLPYFLSIVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGMILDFTSSNGFINNAIHFFGGTRILFMQDPKWFQPIYVISQVWQTLGWGSILYLAAL
HHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
TNIDDTLYEAAKMDGANRWQQMLHVTLPGILPTIITMLVLNVGSVLGVGFEKVLLLQNPL
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
VYSTGDVVSTYLYRVGILSSNFSYATAIGIFEAIIGLVLVLGSNRISAKITKTSLW
EECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MKSIKKYWQLYLIVAIPTVYLLVFRYIPMLGNVIAFRTYLPGGSVFGQDWVGLRYFQMFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHH
GDATFWQVFLNTLSIGIWTLIFTFPLPIIFALLLNEVKNRIFKKFIQTASYLPYFLSIVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGMILDFTSSNGFINNAIHFFGGTRILFMQDPKWFQPIYVISQVWQTLGWGSILYLAAL
HHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
TNIDDTLYEAAKMDGANRWQQMLHVTLPGILPTIITMLVLNVGSVLGVGFEKVLLLQNPL
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
VYSTGDVVSTYLYRVGILSSNFSYATAIGIFEAIIGLVLVLGSNRISAKITKTSLW
EECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]