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The map label for this gene is lplC [H]

Identifier: 125623847

GI number: 125623847

Start: 975417

End: 976280

Strand: Direct

Name: lplC [H]

Synonym: llmg_1010

Alternate gene names: 125623847

Gene position: 975417-976280 (Clockwise)

Preceding gene: 125623846

Following gene: 125623848

Centisome position: 38.56

GC content: 35.65

Gene sequence:

>864_bases
ATGAAAGATAGTATCGGTTATAAAATTTTCAAAGTGATCAATGCAATTATTTTGATTTTGATTGTCATTGCAACAGTCTA
CCCCTTTTGGAATGTTGTTGTTCAGTCATTTTCAAGTGAAAATGCAATCACAGCAGGAAATGTTGTTCTAACACCCGTTG
GTTTTAATTTAGAAACCTATAAATACGTTATGAGCGACCCTATTTTCTGGATTAATTATAAAAACACCATTATTTATACA
GTTGTTGGAACAGCAATTTCTTTATTTTTGACGACGACACTTGCTTATGTCACCTCAAAAAAATATCTTCCAGGGCGTAA
ATTTTTCATTGGACTTTCTGTTTTCACTATGTTCTTTGCTGGAGGATTGATTCCAAACTACTTGTTGATTAAATCATTAG
GTTGGATGAATACGATGTGGGCAGTCACAGTACCAGGAGCACTTTCTATTTTCAATATGTTGATTATGAAGTCTTTCTTT
GAATCAATGCCAGATGCATTAGAAGAAGCAGCGATTATTGATGGAGCAACTCCATTTCAAATTTTGATGCGAATCATCTT
GCCATTATCTAAACCAATATTGGCAACCATGGTCTTATTCTATGCGGTTGGAGCATGGAATGCTTGGTTTGGAGCTTTCC
TCTACATGGATAACAAGAATCTCTTTCCGGTTTCAGTATATCTACGAAATCTAGTCAAAGGAGCAACGGGTGCCGAGGCG
CAAAGTGCTGATGAACAGAGTCAGGTGAGTTCAAACATTAAGGCAGTAACCATGGTCTTAACAGTATTACCTGTACTAAT
CGTTTATCCATTTTGTCAAAAATATTTTGTTAATGGAATCATGATTGGTTCTGTTAAGGGTTAA

Upstream 100 bases:

>100_bases
ATTGGTATTTTTGAAGCGATTATTGGTTTAGTTCTAGTACTGGGTTCTAACAGAATTTCTGCGAAGATTACCAAGACTTC
ATTATGGTAAGGAGGATAAA

Downstream 100 bases:

>100_bases
GTTAGTCAGTTTCTTGAATTAAAACTGATACGTTTTAGTTCAGATTATATAAATACATAAGGAGCACAAGAATGAAATCT
TGGAAAAATTTATTGGTTGG

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKDSIGYKIFKVINAIILILIVIATVYPFWNVVVQSFSSENAITAGNVVLTPVGFNLETYKYVMSDPIFWINYKNTIIYT
VVGTAISLFLTTTLAYVTSKKYLPGRKFFIGLSVFTMFFAGGLIPNYLLIKSLGWMNTMWAVTVPGALSIFNMLIMKSFF
ESMPDALEEAAIIDGATPFQILMRIILPLSKPILATMVLFYAVGAWNAWFGAFLYMDNKNLFPVSVYLRNLVKGATGAEA
QSADEQSQVSSNIKAVTMVLTVLPVLIVYPFCQKYFVNGIMIGSVKG

Sequences:

>Translated_287_residues
MKDSIGYKIFKVINAIILILIVIATVYPFWNVVVQSFSSENAITAGNVVLTPVGFNLETYKYVMSDPIFWINYKNTIIYT
VVGTAISLFLTTTLAYVTSKKYLPGRKFFIGLSVFTMFFAGGLIPNYLLIKSLGWMNTMWAVTVPGALSIFNMLIMKSFF
ESMPDALEEAAIIDGATPFQILMRIILPLSKPILATMVLFYAVGAWNAWFGAFLYMDNKNLFPVSVYLRNLVKGATGAEA
QSADEQSQVSSNIKAVTMVLTVLPVLIVYPFCQKYFVNGIMIGSVKG
>Mature_287_residues
MKDSIGYKIFKVINAIILILIVIATVYPFWNVVVQSFSSENAITAGNVVLTPVGFNLETYKYVMSDPIFWINYKNTIIYT
VVGTAISLFLTTTLAYVTSKKYLPGRKFFIGLSVFTMFFAGGLIPNYLLIKSLGWMNTMWAVTVPGALSIFNMLIMKSFF
ESMPDALEEAAIIDGATPFQILMRIILPLSKPILATMVLFYAVGAWNAWFGAFLYMDNKNLFPVSVYLRNLVKGATGAEA
QSADEQSQVSSNIKAVTMVLTVLPVLIVYPFCQKYFVNGIMIGSVKG

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=27.6595744680851, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790464, Length=208, Percent_Identity=30.7692307692308, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789860, Length=281, Percent_Identity=23.1316725978648, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31852; Mature: 31852

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSIGYKIFKVINAIILILIVIATVYPFWNVVVQSFSSENAITAGNVVLTPVGFNLETY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCCCHHHH
KYVMSDPIFWINYKNTIIYTVVGTAISLFLTTTLAYVTSKKYLPGRKFFIGLSVFTMFFA
HHHHCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GGLIPNYLLIKSLGWMNTMWAVTVPGALSIFNMLIMKSFFESMPDALEEAAIIDGATPFQ
CCCCHHHHHHHHCCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILMRIILPLSKPILATMVLFYAVGAWNAWFGAFLYMDNKNLFPVSVYLRNLVKGATGAEA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCCCCC
QSADEQSQVSSNIKAVTMVLTVLPVLIVYPFCQKYFVNGIMIGSVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
>Mature Secondary Structure
MKDSIGYKIFKVINAIILILIVIATVYPFWNVVVQSFSSENAITAGNVVLTPVGFNLETY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCCCHHHH
KYVMSDPIFWINYKNTIIYTVVGTAISLFLTTTLAYVTSKKYLPGRKFFIGLSVFTMFFA
HHHHCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GGLIPNYLLIKSLGWMNTMWAVTVPGALSIFNMLIMKSFFESMPDALEEAAIIDGATPFQ
CCCCHHHHHHHHCCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILMRIILPLSKPILATMVLFYAVGAWNAWFGAFLYMDNKNLFPVSVYLRNLVKGATGAEA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCCCCC
QSADEQSQVSSNIKAVTMVLTVLPVLIVYPFCQKYFVNGIMIGSVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]