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The map label for this gene is ps301 [H]

Identifier: 125623641

GI number: 125623641

Start: 779032

End: 780165

Strand: Reverse

Name: ps301 [H]

Synonym: llmg_0790

Alternate gene names: 125623641

Gene position: 780165-779032 (Counterclockwise)

Preceding gene: 125623642

Following gene: 125623626

Centisome position: 30.84

GC content: 27.69

Gene sequence:

>1134_bases
ATGTGGGTAGAAGATTTACCTAATGGCAAATATAAGTATTGTGAGCGCTATACAGATACTAAAGGTAAGACAAGGAAAGT
ATCAGTAACACTAGATAAAAATAGCTCTAGGGCGCAAAATGAAGCTTCTAGGCTATTGTATAATAAAATAGATGCAAAGC
TTGAAAAAGAAAAACAAAAAATTGAAGATGAGCAAAATAAAATAGCTTCTATCACTTTCTGGGAAGTCCAAGATGAGTAT
TTTTCAATTTATGAAGAAACAGTAAAAGCTAAAACTGCCTCACTAAGAGATACAGCAAAGAAAAAAATTAGAAGTTTAGT
TAGTGAAGAGACTTTATTATCAGACGTTAACTCTGTTTTTATTTTAGAGATTTTGGAAAAACTATATTATAAAGAAAATT
ATTCTTATTCTTATATCAAGACACTTAAAGCTTCTTTTAACATGGTTTTAGATTATGCTATATCAAAAGAATATCTAGCA
GTTAATCCTATTTCTAATGTGAAAATCAAAAAGAAAGTCTTAACCCTAGAACAAAGAGAAAAGAAAAAAGAAAAATATCT
TGAGCGTAGCGAATTAAAACAGGTCATAAAAGATATGGCAGTAATTGATAAATCAACCTCATTATTAATTGAATTTATGT
CACTTACAGGTCTAAGATTTGGAGAATGTGTAGCGATTCAAAGCAAGAATATTGAAAATAATGTTTTACATATAAACGGG
ACATGGGATAGTGTTTCTAACTCTAAAACAACAACTAAAAATATTTATTCAGATAGAAAAATCACGCTACCAAAAAGATG
TCTTCAAATAATTGATGAATATCCTTTAAAATATCCAAAGGATAAAATAAGCAAAGATAATTATATATTTATTTATAAAA
ACAATAAACCATATAACATTTCTGTTGTGAATAGCAGACTAAAAAAAATAAATTCATCTAAAAATTTAAGTACACATATT
TTCAGGCATACTCATATTGCTTTATTAACTGAGCTTGGAATACCTTTGAAGTCCATCATGGAAAGAGTGGGTCATAATAA
CCCTCAAACAACTCTTTCTATATATTCTCATGTAACTGAAGAAATGAGCAAAAATATAATAGAAAAACTAAATGAAATAG
ACCTCTTAAATTAG

Upstream 100 bases:

>100_bases
TTTGGACGGACGAGGGTGGATTTAAACTATAAAGTAGTGCAAAAGCTTTTAATAAGCTTTTTACTATACCATTTTACCAG
AAATGAGGTATAAAAAGCAA

Downstream 100 bases:

>100_bases
AGGTCTATTTTTTAAAAAAGGGGCAGAAAAAGGGGCAGAAATTTGACAATATTTAATTATCTTTGATAACTTTTAAAAAC
ACCATAACTACTAAACACCT

Product: putative integrase

Products: NA

Alternate protein names: Int-TnX [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MWVEDLPNGKYKYCERYTDTKGKTRKVSVTLDKNSSRAQNEASRLLYNKIDAKLEKEKQKIEDEQNKIASITFWEVQDEY
FSIYEETVKAKTASLRDTAKKKIRSLVSEETLLSDVNSVFILEILEKLYYKENYSYSYIKTLKASFNMVLDYAISKEYLA
VNPISNVKIKKKVLTLEQREKKKEKYLERSELKQVIKDMAVIDKSTSLLIEFMSLTGLRFGECVAIQSKNIENNVLHING
TWDSVSNSKTTTKNIYSDRKITLPKRCLQIIDEYPLKYPKDKISKDNYIFIYKNNKPYNISVVNSRLKKINSSKNLSTHI
FRHTHIALLTELGIPLKSIMERVGHNNPQTTLSIYSHVTEEMSKNIIEKLNEIDLLN

Sequences:

>Translated_377_residues
MWVEDLPNGKYKYCERYTDTKGKTRKVSVTLDKNSSRAQNEASRLLYNKIDAKLEKEKQKIEDEQNKIASITFWEVQDEY
FSIYEETVKAKTASLRDTAKKKIRSLVSEETLLSDVNSVFILEILEKLYYKENYSYSYIKTLKASFNMVLDYAISKEYLA
VNPISNVKIKKKVLTLEQREKKKEKYLERSELKQVIKDMAVIDKSTSLLIEFMSLTGLRFGECVAIQSKNIENNVLHING
TWDSVSNSKTTTKNIYSDRKITLPKRCLQIIDEYPLKYPKDKISKDNYIFIYKNNKPYNISVVNSRLKKINSSKNLSTHI
FRHTHIALLTELGIPLKSIMERVGHNNPQTTLSIYSHVTEEMSKNIIEKLNEIDLLN
>Mature_377_residues
MWVEDLPNGKYKYCERYTDTKGKTRKVSVTLDKNSSRAQNEASRLLYNKIDAKLEKEKQKIEDEQNKIASITFWEVQDEY
FSIYEETVKAKTASLRDTAKKKIRSLVSEETLLSDVNSVFILEILEKLYYKENYSYSYIKTLKASFNMVLDYAISKEYLA
VNPISNVKIKKKVLTLEQREKKKEKYLERSELKQVIKDMAVIDKSTSLLIEFMSLTGLRFGECVAIQSKNIENNVLHING
TWDSVSNSKTTTKNIYSDRKITLPKRCLQIIDEYPLKYPKDKISKDNYIFIYKNNKPYNISVVNSRLKKINSSKNLSTHI
FRHTHIALLTELGIPLKSIMERVGHNNPQTTLSIYSHVTEEMSKNIIEKLNEIDLLN

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43936; Mature: 43936

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVEDLPNGKYKYCERYTDTKGKTRKVSVTLDKNSSRAQNEASRLLYNKIDAKLEKEKQK
CCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IEDEQNKIASITFWEVQDEYFSIYEETVKAKTASLRDTAKKKIRSLVSEETLLSDVNSVF
HHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILEILEKLYYKENYSYSYIKTLKASFNMVLDYAISKEYLAVNPISNVKIKKKVLTLEQRE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHH
KKKEKYLERSELKQVIKDMAVIDKSTSLLIEFMSLTGLRFGECVAIQSKNIENNVLHING
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEC
TWDSVSNSKTTTKNIYSDRKITLPKRCLQIIDEYPLKYPKDKISKDNYIFIYKNNKPYNI
CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCEEE
SVVNSRLKKINSSKNLSTHIFRHTHIALLTELGIPLKSIMERVGHNNPQTTLSIYSHVTE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
EMSKNIIEKLNEIDLLN
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWVEDLPNGKYKYCERYTDTKGKTRKVSVTLDKNSSRAQNEASRLLYNKIDAKLEKEKQK
CCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IEDEQNKIASITFWEVQDEYFSIYEETVKAKTASLRDTAKKKIRSLVSEETLLSDVNSVF
HHHHHCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILEILEKLYYKENYSYSYIKTLKASFNMVLDYAISKEYLAVNPISNVKIKKKVLTLEQRE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHH
KKKEKYLERSELKQVIKDMAVIDKSTSLLIEFMSLTGLRFGECVAIQSKNIENNVLHING
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEC
TWDSVSNSKTTTKNIYSDRKITLPKRCLQIIDEYPLKYPKDKISKDNYIFIYKNNKPYNI
CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCEEE
SVVNSRLKKINSSKNLSTHIFRHTHIALLTELGIPLKSIMERVGHNNPQTTLSIYSHVTE
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
EMSKNIIEKLNEIDLLN
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10532372; 11337471 [H]