| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is 125623608
Identifier: 125623608
GI number: 125623608
Start: 743605
End: 744438
Strand: Direct
Name: 125623608
Synonym: llmg_0754
Alternate gene names: NA
Gene position: 743605-744438 (Clockwise)
Preceding gene: 125623607
Following gene: 125623609
Centisome position: 29.4
GC content: 32.85
Gene sequence:
>834_bases ATGCCTTATAAACGTTATGGGGAAATTTTTAAAAAACTACGAGAACAAAAGAATTTTTCGCTTTCTCATTTTTCAGAAAT AGGTATTTCAAAAGCGAGTTTATCAAGATTTGAATTAGGTCAAACTATGATAAGTTTTGAACGCTTGGATAGTGCGCTGC AAGAGATGAATGTGACTTTAGCCGAATATGAACATTTTATCAATAATTTTTCAATGGATTATAAAGAAGAATTTTTAGAA GATATAATTCTTGCGGATATTGCAGATGACGTCGATAAACTTCACAAGCTCTATCTAGAAGCTATGGAATATGATTCAAA AATGCTAGCTTATTGTGCTAAAAGTCGTTATGAAATACTGACACAAACGGAAGCTGATGATGTGGTTGAATATCTCTATG ATGTTGGAGAATGGGGATATTTTGAACTTTCGATTTTTTATCTGACTTTGGACAGTTTCAGTGAACGAGAAATTATGTAT TTGATGAAAGAACTCTGGGGGAAGAGTAAACACTTATATGGTGTTTTTAAATATCGCAGAAGAGTTCTTCAATCTTCGTA TCGAGCGGTTGTTTTGCTTTCATCAAAAGGGGCTCGTGACTCAGCTAGAAGTATCTTGCAAAAAAGTTACCCCAAAGATG ATTTCTACGACCTCTATGTTGAAAATCTAAGAAATTTGGCGCATGGTTTTTATAGCTATTGTTTCAAAGATAGGATAAGA GCTGAAAAGCAAATCAAAAAGGCCATTGAAGTTTTTCGGCAAGTTGGTTATGAAGATTTAGCAGATTATTATCAAAAACG ATATCAAAAGCTTTTAGGAAAATTATTAACATAA
Upstream 100 bases:
>100_bases CGCAAGTCATTTTGCCACTAAATCCCAAAAACCTAAATCAAATATTCGTATTGGTAAAAAGTAATCGGTTAATAAAAAAG AAAAATTTCGAGGAAAAAAT
Downstream 100 bases:
>100_bases AAAAGTCTCCAGATTACTTCGTTGCATTTCTGCAATGATTTAAAAAAGAGGCTTTTTTTCTGATAAAATGAAGTTGAAGA TAAAAGAAAGCGTGCTCGAT
Product: Rgg family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; Rgg Family Transcriptional Regulator; MutR Family Transcriptional Regulator; Transcriptional Regulator MutR Family
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTLAEYEHFINNFSMDYKEEFLE DIILADIADDVDKLHKLYLEAMEYDSKMLAYCAKSRYEILTQTEADDVVEYLYDVGEWGYFELSIFYLTLDSFSEREIMY LMKELWGKSKHLYGVFKYRRRVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDRIR AEKQIKKAIEVFRQVGYEDLADYYQKRYQKLLGKLLT
Sequences:
>Translated_277_residues MPYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTLAEYEHFINNFSMDYKEEFLE DIILADIADDVDKLHKLYLEAMEYDSKMLAYCAKSRYEILTQTEADDVVEYLYDVGEWGYFELSIFYLTLDSFSEREIMY LMKELWGKSKHLYGVFKYRRRVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDRIR AEKQIKKAIEVFRQVGYEDLADYYQKRYQKLLGKLLT >Mature_276_residues PYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTLAEYEHFINNFSMDYKEEFLED IILADIADDVDKLHKLYLEAMEYDSKMLAYCAKSRYEILTQTEADDVVEYLYDVGEWGYFELSIFYLTLDSFSEREIMYL MKELWGKSKHLYGVFKYRRRVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDRIRA EKQIKKAIEVFRQVGYEDLADYYQKRYQKLLGKLLT
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33068; Mature: 32937
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTL CCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEYEHFINNFSMDYKEEFLEDIILADIADDVDKLHKLYLEAMEYDSKMLAYCAKSRYEIL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTEADDVVEYLYDVGEWGYFELSIFYLTLDSFSEREIMYLMKELWGKSKHLYGVFKYRR HCCCHHHHHHHHHHCCCCCCEEHEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH RVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDRIR HHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AEKQIKKAIEVFRQVGYEDLADYYQKRYQKLLGKLLT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PYKRYGEIFKKLREQKNFSLSHFSEIGISKASLSRFELGQTMISFERLDSALQEMNVTL CHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEYEHFINNFSMDYKEEFLEDIILADIADDVDKLHKLYLEAMEYDSKMLAYCAKSRYEIL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTEADDVVEYLYDVGEWGYFELSIFYLTLDSFSEREIMYLMKELWGKSKHLYGVFKYRR HCCCHHHHHHHHHHCCCCCCEEHEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH RVLQSSYRAVVLLSSKGARDSARSILQKSYPKDDFYDLYVENLRNLAHGFYSYCFKDRIR HHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AEKQIKKAIEVFRQVGYEDLADYYQKRYQKLLGKLLT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA