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The map label for this gene is tnp981 [H]

Identifier: 125623570

GI number: 125623570

Start: 698693

End: 699532

Strand: Reverse

Name: tnp981 [H]

Synonym: llmg_0714

Alternate gene names: 125623570

Gene position: 699532-698693 (Counterclockwise)

Preceding gene: 125623573

Following gene: 125623569

Centisome position: 27.66

GC content: 35.95

Gene sequence:

>840_bases
ATGGCTCAAACCATACAAACTTTAGCACTCAATGTCAGACTAAGCTGCCAACTCCTTGATGTTCCTGAATCAAGTTATTA
TGAACAAATTAACCGACATCCATCTAAAACTCAATTAAGGAGACAATACCTGTCACTCAAAATTTCTCAACTCTTCAATG
CTAACCGAGGAATCTATGGTGCTCCTAAAATTCATCATCTTCTACTTAAACAAGGGGAAAAAGTCGGGTTAAAACTGGTA
CAGAAGCTAATGAAGCAACTTCAACTCAAGTCTGTAGTCATTAAGAAATTTAAGCCTGGATACTCACTAAGTGATCACAT
CAATCGAAAAAATCTCATACAGACTGAACCTACAAAGAAAAATAAGGTTTGGTCAACCGACATTACTTATATTCCTACTC
AACAAGGATGGGCTTATCTCTCAACCATTATGGATCATTATACTAAAAAAGTCATTGCTTGGGATTTGGGCAAGCGAATG
ACTGTAGAATTAGTGCAAAGAACTTTAAATAAGGCCATTAAATCACAAGACTATCCAGAAGCTGTTATTCTTCATTCTGA
CCAAGGAAGCCAGTATACGAGTCTAGAGTATGAAGAGTTGCTTAAGTATTATGGGATGACTCACTCTTTCAGTCGAAGGG
GATACGCTTATCATAATGCCAGTCTTGAATCTTGGCATAGACATTTAAAAAGAGAGTGGGTGTATCAATTTAAATATAAG
AACTTTGAAGAAGCCTATCAGAGTATTTTCTGGTACATCGAAGCCTTTTATAATTCAAAACGAATCCATCAAAGTTTAGG
GTATCTTACACCTAATCAATTTGAAAAGGTAAGTGCTTAA

Upstream 100 bases:

>100_bases
TAGAATTAAAAAGACAACTGGCTAAAGTTAAGGAAGAACGAGACATCTTAAAAAAAGTATTGACCATATTCGCCGAGAAA
AAGAAGTGAGTGCTGCGGAT

Downstream 100 bases:

>100_bases
AATAAATAGATTAAAATTCTACGTTTGTTACTCTAAAAACTTGACTTAACGTCACTTCTTGAGTTAACTTCGCATAATAA
AGAAAACAAAGACTTTTTGG

Product: transposase for insertion sequence element IS981F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAQTIQTLALNVRLSCQLLDVPESSYYEQINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDHYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYAYHNASLESWHRHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

Sequences:

>Translated_279_residues
MAQTIQTLALNVRLSCQLLDVPESSYYEQINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDHYTKKVIAWDLGKRM
TVELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYAYHNASLESWHRHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
>Mature_278_residues
AQTIQTLALNVRLSCQLLDVPESSYYEQINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQ
KLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYIPTQQGWAYLSTIMDHYTKKVIAWDLGKRMT
VELVQRTLNKAIKSQDYPEAVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYAYHNASLESWHRHLKREWVYQFKYKN
FEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=245, Percent_Identity=26.9387755102041, Blast_Score=107, Evalue=2e-23,
Organism=Escherichia coli, GI1788405, Length=274, Percent_Identity=31.3868613138686, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787263, Length=274, Percent_Identity=31.3868613138686, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786753, Length=274, Percent_Identity=31.3868613138686, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786570, Length=274, Percent_Identity=31.3868613138686, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786490, Length=274, Percent_Identity=31.3868613138686, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1789981, Length=230, Percent_Identity=33.4782608695652, Blast_Score=127, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32997; Mature: 32866

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTIQTLALNVRLSCQLLDVPESSYYEQINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYIPTQQGWAYLSTIMDHYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYAYHNASLESWHRHLKREWVYQFKYK
EEEEECCCCCCCCCCCHHHHHHHHCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
AQTIQTLALNVRLSCQLLDVPESSYYEQINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYIPTQQGWAYLSTIMDHYTKKVIAWDLGKRMTVELVQRTLNKAIKSQDYPE
CCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
AVILHSDQGSQYTSLEYEELLKYYGMTHSFSRRGYAYHNASLESWHRHLKREWVYQFKYK
EEEEECCCCCCCCCCCHHHHHHHHCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKVSA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]