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The map label for this gene is pabC [H]

Identifier: 125623470

GI number: 125623470

Start: 597323

End: 598960

Strand: Direct

Name: pabC [H]

Synonym: llmg_0609

Alternate gene names: 125623470

Gene position: 597323-598960 (Clockwise)

Preceding gene: 125623469

Following gene: 125623471

Centisome position: 23.61

GC content: 35.41

Gene sequence:

>1638_bases
GTGGACAAAGAAACAACTGAATTTTCTCGAGGAAGTTTTAAAGAAAAAATACTTCGTCAACTTGAAGAAAATGCAGCGAA
ACAAGCAGAAACTAAGTTCCCAGACCCTGAAGATTTCGAACGTCCCAAAGGGAGTGAGCCAGTAACTTCTGAGCGAAAAA
TTGAACCACGGAAAGTTGAACTTGAACCGTTCAAGCTTCCAGTTTTCAAATTTCCAGAAGCAGATGAAGAAGAAGATTTT
CAAGCGCAAGTAGATGAAAACACTTCTCAAGAAACGGGTTCACTGCGTCAAAAATTAGAAGAAATAGTTTCTGATGAAAA
CCAAGAACAAACTTTCCCACCTCCTTTTTCAAGAAGTGAATCAGCAGTTCAAGAAGAACCGATTGAACAGGAAAATATTT
CAGAAAAAAGAGAATCAGAAAAAATGGTGAAACACCAACCTTCAAGAAGAACGACTGCGCCATCTAAGAAGAATTCTTCT
GGAAAGAAAAACAAAAATAAGAAAAAGAAAAAAGTTACGGCAGGAAAAATTATCACTGTAATTGTTGTTCTTTTAATTTT
GGTAGTTGGTGGAACAGGCTGGTATGGTTATAATTTTGTAAAATCAGGAATTCAACCTCTTGATTCTAAAAATACAGCAG
TTAAATCAATCAGTATTCCAGCGGGGTCAAGTAGTAAACAAATTGGTGAAATTTTGCAAAGACAGTCCATTATTAAAAAT
GGAATGATATTTCAGTATTACACAAAATTTAAAAATTACTCAGAGTTTAAGAGCGGCTATTATAACCTTTCGCCAAACAT
GAGTTTATCTACTATTGCTTCCAAACTGGAAGAAGGGGGAACCGAAAAACCTGTTGCCCCTACCTTGGGTAAAATTTTAA
TTCCTGAAGGCTATACATTGACACAAATAGCGAAAGCAGTTACAGTCAATAGTAACAGTCAAGAAAAAAATGCTAAAACG
CCATTCTCAGAAGCTGACTTTATGAAGACTGTCCAAGATCCTACTTTTATTGCAAAAATGGTAAAAGCTTATCCTAAACT
TTTTGCAAGTTTACCTACAAAAGATTCAGGGATCAAATATCAGTTAGAAGGCTATTTATTCCCTGCAACCTATGATTATA
CAAAATCATCAAGTGTTGAGTCTGTGATTGAAAATATGATTGAAGCGATGAATGCTCAACTCACGCCTTACTACGACACG
ATGACGCAAAAAAATCTGACTGTTAATGATGTTTTGAGTTTAGCTGCGCTGGTTGAAAAAGAAGCCAATAATGACGATGA
TCGTCGAAATGTAGCGGCTACTTTTTATAACCGTATGAATCAAGGAATGACTTTGGGTTCTAATTTATCAATTCTATATG
CTGAAGGTAAGTTAGGTGAAAAAACAAGCTTAGCAGAAGATGCTAATATTGATACTAACCTAGATTCGCCTTATAACTTG
TATGCCAATACTGGATTTGGCCCTGGTCCTGTGGATAGTCCTAGTCTGTCATCAATTAAGGCGGTGCTTAATCCTGCGCA
AAATGATTATCTTTACTTTGTTGCTGATGTAACAACTGGTAAAGTTTATTTTGCGAAAACCTTAGAAGAACAAAATGCAA
ATGTTCAAAAATATGTGAATGATAAATTAAGTAAATAG

Upstream 100 bases:

>100_bases
TATTTTCTTTTTATTTGTAAAAGTTTAAAAGAACGGTTACAATTATAAAAAGAAAAATTTAATTATTGAGCGAGAGCTAA
TCATAAGGAGAACAAATTTG

Downstream 100 bases:

>100_bases
AGTATGATTGATTTTGATTTAACTAAAAAGAAAAGTTTATAATAAAAGGAAAGAAATAAAATGGAAAAAACATTCCCAAT
GACCAAAGAAGGTCTTGATA

Product: putative aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPKGSEPVTSERKIEPRKVELEPFKLPVFKFPEADEEEDF
QAQVDENTSQETGSLRQKLEEIVSDENQEQTFPPPFSRSESAVQEEPIEQENISEKRESEKMVKHQPSRRTTAPSKKNSS
GKKNKNKKKKKVTAGKIITVIVVLLILVVGGTGWYGYNFVKSGIQPLDSKNTAVKSISIPAGSSSKQIGEILQRQSIIKN
GMIFQYYTKFKNYSEFKSGYYNLSPNMSLSTIASKLEEGGTEKPVAPTLGKILIPEGYTLTQIAKAVTVNSNSQEKNAKT
PFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDSGIKYQLEGYLFPATYDYTKSSSVESVIENMIEAMNAQLTPYYDT
MTQKNLTVNDVLSLAALVEKEANNDDDRRNVAATFYNRMNQGMTLGSNLSILYAEGKLGEKTSLAEDANIDTNLDSPYNL
YANTGFGPGPVDSPSLSSIKAVLNPAQNDYLYFVADVTTGKVYFAKTLEEQNANVQKYVNDKLSK

Sequences:

>Translated_545_residues
MDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPKGSEPVTSERKIEPRKVELEPFKLPVFKFPEADEEEDF
QAQVDENTSQETGSLRQKLEEIVSDENQEQTFPPPFSRSESAVQEEPIEQENISEKRESEKMVKHQPSRRTTAPSKKNSS
GKKNKNKKKKKVTAGKIITVIVVLLILVVGGTGWYGYNFVKSGIQPLDSKNTAVKSISIPAGSSSKQIGEILQRQSIIKN
GMIFQYYTKFKNYSEFKSGYYNLSPNMSLSTIASKLEEGGTEKPVAPTLGKILIPEGYTLTQIAKAVTVNSNSQEKNAKT
PFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDSGIKYQLEGYLFPATYDYTKSSSVESVIENMIEAMNAQLTPYYDT
MTQKNLTVNDVLSLAALVEKEANNDDDRRNVAATFYNRMNQGMTLGSNLSILYAEGKLGEKTSLAEDANIDTNLDSPYNL
YANTGFGPGPVDSPSLSSIKAVLNPAQNDYLYFVADVTTGKVYFAKTLEEQNANVQKYVNDKLSK
>Mature_545_residues
MDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPKGSEPVTSERKIEPRKVELEPFKLPVFKFPEADEEEDF
QAQVDENTSQETGSLRQKLEEIVSDENQEQTFPPPFSRSESAVQEEPIEQENISEKRESEKMVKHQPSRRTTAPSKKNSS
GKKNKNKKKKKVTAGKIITVIVVLLILVVGGTGWYGYNFVKSGIQPLDSKNTAVKSISIPAGSSSKQIGEILQRQSIIKN
GMIFQYYTKFKNYSEFKSGYYNLSPNMSLSTIASKLEEGGTEKPVAPTLGKILIPEGYTLTQIAKAVTVNSNSQEKNAKT
PFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDSGIKYQLEGYLFPATYDYTKSSSVESVIENMIEAMNAQLTPYYDT
MTQKNLTVNDVLSLAALVEKEANNDDDRRNVAATFYNRMNQGMTLGSNLSILYAEGKLGEKTSLAEDANIDTNLDSPYNL
YANTGFGPGPVDSPSLSSIKAVLNPAQNDYLYFVADVTTGKVYFAKTLEEQNANVQKYVNDKLSK

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=330, Percent_Identity=25.1515151515152, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 60846; Mature: 60846

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPKGSEPVTSERKIEPRKVE
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE
LEPFKLPVFKFPEADEEEDFQAQVDENTSQETGSLRQKLEEIVSDENQEQTFPPPFSRSE
CCCEECCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SAVQEEPIEQENISEKRESEKMVKHQPSRRTTAPSKKNSSGKKNKNKKKKKVTAGKIITV
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IVVLLILVVGGTGWYGYNFVKSGIQPLDSKNTAVKSISIPAGSSSKQIGEILQRQSIIKN
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
GMIFQYYTKFKNYSEFKSGYYNLSPNMSLSTIASKLEEGGTEKPVAPTLGKILIPEGYTL
CCHHHHHHHHCCHHHHHCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHH
TQIAKAVTVNSNSQEKNAKTPFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDSGIKY
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
QLEGYLFPATYDYTKSSSVESVIENMIEAMNAQLTPYYDTMTQKNLTVNDVLSLAALVEK
EECCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHH
EANNDDDRRNVAATFYNRMNQGMTLGSNLSILYAEGKLGEKTSLAEDANIDTNLDSPYNL
HCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
YANTGFGPGPVDSPSLSSIKAVLNPAQNDYLYFVADVTTGKVYFAKTLEEQNANVQKYVN
EEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHHHCCHHHHHHH
DKLSK
HHCCC
>Mature Secondary Structure
MDKETTEFSRGSFKEKILRQLEENAAKQAETKFPDPEDFERPKGSEPVTSERKIEPRKVE
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE
LEPFKLPVFKFPEADEEEDFQAQVDENTSQETGSLRQKLEEIVSDENQEQTFPPPFSRSE
CCCEECCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SAVQEEPIEQENISEKRESEKMVKHQPSRRTTAPSKKNSSGKKNKNKKKKKVTAGKIITV
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IVVLLILVVGGTGWYGYNFVKSGIQPLDSKNTAVKSISIPAGSSSKQIGEILQRQSIIKN
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
GMIFQYYTKFKNYSEFKSGYYNLSPNMSLSTIASKLEEGGTEKPVAPTLGKILIPEGYTL
CCHHHHHHHHCCHHHHHCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHH
TQIAKAVTVNSNSQEKNAKTPFSEADFMKTVQDPTFIAKMVKAYPKLFASLPTKDSGIKY
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
QLEGYLFPATYDYTKSSSVESVIENMIEAMNAQLTPYYDTMTQKNLTVNDVLSLAALVEK
EECCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHH
EANNDDDRRNVAATFYNRMNQGMTLGSNLSILYAEGKLGEKTSLAEDANIDTNLDSPYNL
HCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
YANTGFGPGPVDSPSLSSIKAVLNPAQNDYLYFVADVTTGKVYFAKTLEEQNANVQKYVN
EEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHHHCCHHHHHHH
DKLSK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]