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The map label for this gene is yffB [H]

Identifier: 125623396

GI number: 125623396

Start: 528887

End: 529357

Strand: Reverse

Name: yffB [H]

Synonym: llmg_0529

Alternate gene names: 125623396

Gene position: 529357-528887 (Counterclockwise)

Preceding gene: 125623398

Following gene: 125623379

Centisome position: 20.93

GC content: 38.43

Gene sequence:

>471_bases
ATGAAATTATCATCTGGTTGGGAACAATCTGTTTACGTTTTACTTATTTTGGCAAGACTTCCTGAAAATCGGACGATGTC
ATCCATTGCACTTGCTAATCGTCTCAAAGTTTCACCCTCTTATCTCAAGAAAATAATCAAATCGCTCGTTGATGAAGGAC
TTTTACGCTCAACAACTGGAAAAAATGGCGGCTTCTCTCTCAATAAAGATCTTCATGATATTAGTTTTTATGATGTCTTC
TTGGCCATTGAGGGCCGTGGACGAATTTTTCAAAGTCAAGGACTCTTACAAAATTTTATTGGTGCAGAGTCTGGTAAAGC
ACAACATTGTGCGATTACAACTGCGCTTGATGAGATTGAAAATACTCTTGTCAGAACCTTGTCAAATGTATCGCTAGCGC
AAGTTGCTGACGAAACCCAATATAATTACAATCTCGGCTATCTTGATGAGTGGATTGACGAAATGGATTGA

Upstream 100 bases:

>100_bases
TATAGTTATTGGAGACATCTCTTATCTCTAATATAAATGATACTACTTTTTTTATTTAGTGTCAATTTTTTTTACTAAAA
ATGTTTAAGGAGTTTTTATT

Downstream 100 bases:

>100_bases
AAAATTTACTGACAGAATTTCTGGCAGTTCATTGTGAATAGAAAAAATTGCTGACGTTAATCTCGTCAGCAATTTTTTCA
TTGTTTCATTATTTTGTTTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLHDISFYDVF
LAIEGRGRIFQSQGLLQNFIGAESGKAQHCAITTALDEIENTLVRTLSNVSLAQVADETQYNYNLGYLDEWIDEMD

Sequences:

>Translated_156_residues
MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLHDISFYDVF
LAIEGRGRIFQSQGLLQNFIGAESGKAQHCAITTALDEIENTLVRTLSNVSLAQVADETQYNYNLGYLDEWIDEMD
>Mature_156_residues
MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLHDISFYDVF
LAIEGRGRIFQSQGLLQNFIGAESGKAQHCAITTALDEIENTLVRTLSNVSLAQVADETQYNYNLGYLDEWIDEMD

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17421; Mature: 17421

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTG
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
KNGGFSLNKDLHDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKAQHCAITTALDEIE
CCCCEECCCCCHHHHEEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
NTLVRTLSNVSLAQVADETQYNYNLGYLDEWIDEMD
HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTG
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
KNGGFSLNKDLHDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKAQHCAITTALDEIE
CCCCEECCCCCHHHHEEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
NTLVRTLSNVSLAQVADETQYNYNLGYLDEWIDEMD
HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7773380; 11337471 [H]