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The map label for this gene is aspC

Identifier: 125623333

GI number: 125623333

Start: 459608

End: 460744

Strand: Direct

Name: aspC

Synonym: llmg_0466

Alternate gene names: NA

Gene position: 459608-460744 (Clockwise)

Preceding gene: 125623332

Following gene: 125623334

Centisome position: 18.17

GC content: 36.94

Gene sequence:

>1137_bases
ATGAAAGAGATGCTAATCATAACCCCGGGTCCAACCGCTGTGGCTGAAAATGTTCGTCTAGCAAGAGCGAAAGTAACAAC
AAATCCAGATATTGATTTAGAATTTTATGATTTCTATAAAAGGACTTGCGATAAACTTGCTCAATTTTTAAAAACTAAAA
ATGACCTTAGAATTCTGGCGGGGGAAGGAATTTTAGGTTTGGAAGCAGCTTGTGCTTCATTGACTGAATCAGGCGACCGT
GTACTTGTTCTTGATAATGGTATCTTTGGTCATGGATTCGCTGAATTTGTTGAACTATATGGTGGCCAAGCTCTATTGCT
TCAAAGTTCAGAAAAAGAAGCCTTTGACATAGAAATTTTAGAAAAATTCTTAGAAAAAGACCATGATTTTAAATATGCTA
CAATTGTTCATTGTGATACGCCGTCTGGTGTATTAAATGACCTTTCCAAGATTTGTCCCCTTCTCAAAAAATATGGAATT
CTTACTGTTGTAGACTCCGTTGCTGCCATGGGAGGCGAAGATTTACAAGTAGATAATTGGCAAATTGATATTGCACTTGG
AGGCTCACAGAAAGTTTTATCGGCTCCACCTGGACTAACGATTGTTTCTATCTCGCCTCTTGCTTACCAAGCAATGGAAA
ATAGACAAAGCCCTATTGCGAGTTTTTATTGTAATCTCCTGACTTTTAAAGATTATTATGAAAAAAAATGGTTTCCTTAC
ACAATGCCAATTTCAGACATTTATGGATTAGACCAAGCCGTAGACAACATTCTTTTTGACCAAGAAATCTTGAAGCGCCA
TGCGATGATTGGTAAAGCCACAAGAAAAGCGATAAAGAACTCCCCGTTAGAACTTTATTTACAAAACGGCTATTCTAATA
CTGTCAGTGTTATAAAAGTACCAAATGGTCTGAATGACCAAGAACTTTTAAGAAAAATGCGCCAAGATTATCAAGTGATG
ATAACAGGTTCTTTTGACCGTTTAGCTGGTAAAGTTTTGCGCATTGGACATATGGGTGAAAATGCTAGAACTAGCAAAGT
GGCTTATAGCCTCTATGCCCTTCAAAAAGTATTAGAAGAATCAGGTCTTAAATTTGAAACGAGCTTACAGGAAGATTTTT
TGCAAGCACTTAAGTGA

Upstream 100 bases:

>100_bases
CCCTGTACGTCCGATTTCAAAAGAACTAGGTGGCGCTCATGTTACGGCCCTTAAATCACGTCCTAAACTTATTGGTGGAG
AACGTGCGAGGTATGAATAA

Downstream 100 bases:

>100_bases
AAAAAGTAATGATAAAAAATGTAGAAGCTAAAATCTGGCAATTTCGTCATTAAAATCTACTGATTACAAAAAAATAAAAA
TAGAAATGCCCGATATTACT

Product: putative aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKEMLIITPGPTAVAENVRLARAKVTTNPDIDLEFYDFYKRTCDKLAQFLKTKNDLRILAGEGILGLEAACASLTESGDR
VLVLDNGIFGHGFAEFVELYGGQALLLQSSEKEAFDIEILEKFLEKDHDFKYATIVHCDTPSGVLNDLSKICPLLKKYGI
LTVVDSVAAMGGEDLQVDNWQIDIALGGSQKVLSAPPGLTIVSISPLAYQAMENRQSPIASFYCNLLTFKDYYEKKWFPY
TMPISDIYGLDQAVDNILFDQEILKRHAMIGKATRKAIKNSPLELYLQNGYSNTVSVIKVPNGLNDQELLRKMRQDYQVM
ITGSFDRLAGKVLRIGHMGENARTSKVAYSLYALQKVLEESGLKFETSLQEDFLQALK

Sequences:

>Translated_378_residues
MKEMLIITPGPTAVAENVRLARAKVTTNPDIDLEFYDFYKRTCDKLAQFLKTKNDLRILAGEGILGLEAACASLTESGDR
VLVLDNGIFGHGFAEFVELYGGQALLLQSSEKEAFDIEILEKFLEKDHDFKYATIVHCDTPSGVLNDLSKICPLLKKYGI
LTVVDSVAAMGGEDLQVDNWQIDIALGGSQKVLSAPPGLTIVSISPLAYQAMENRQSPIASFYCNLLTFKDYYEKKWFPY
TMPISDIYGLDQAVDNILFDQEILKRHAMIGKATRKAIKNSPLELYLQNGYSNTVSVIKVPNGLNDQELLRKMRQDYQVM
ITGSFDRLAGKVLRIGHMGENARTSKVAYSLYALQKVLEESGLKFETSLQEDFLQALK
>Mature_378_residues
MKEMLIITPGPTAVAENVRLARAKVTTNPDIDLEFYDFYKRTCDKLAQFLKTKNDLRILAGEGILGLEAACASLTESGDR
VLVLDNGIFGHGFAEFVELYGGQALLLQSSEKEAFDIEILEKFLEKDHDFKYATIVHCDTPSGVLNDLSKICPLLKKYGI
LTVVDSVAAMGGEDLQVDNWQIDIALGGSQKVLSAPPGLTIVSISPLAYQAMENRQSPIASFYCNLLTFKDYYEKKWFPY
TMPISDIYGLDQAVDNILFDQEILKRHAMIGKATRKAIKNSPLELYLQNGYSNTVSVIKVPNGLNDQELLRKMRQDYQVM
ITGSFDRLAGKVLRIGHMGENARTSKVAYSLYALQKVLEESGLKFETSLQEDFLQALK

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=366, Percent_Identity=25.9562841530055, Blast_Score=131, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17536281, Length=363, Percent_Identity=27.5482093663912, Blast_Score=138, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6321079, Length=372, Percent_Identity=26.8817204301075, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI17530823, Length=379, Percent_Identity=27.1767810026385, Blast_Score=146, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 42208; Mature: 42208

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEMLIITPGPTAVAENVRLARAKVTTNPDIDLEFYDFYKRTCDKLAQFLKTKNDLRILA
CCCEEEECCCCHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
GEGILGLEAACASLTESGDRVLVLDNGIFGHGFAEFVELYGGQALLLQSSEKEAFDIEIL
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHH
EKFLEKDHDFKYATIVHCDTPSGVLNDLSKICPLLKKYGILTVVDSVAAMGGEDLQVDNW
HHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCE
QIDIALGGSQKVLSAPPGLTIVSISPLAYQAMENRQSPIASFYCNLLTFKDYYEKKWFPY
EEEEEECCCCCEECCCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE
TMPISDIYGLDQAVDNILFDQEILKRHAMIGKATRKAIKNSPLELYLQNGYSNTVSVIKV
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEC
PNGLNDQELLRKMRQDYQVMITGSFDRLAGKVLRIGHMGENARTSKVAYSLYALQKVLEE
CCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHH
SGLKFETSLQEDFLQALK
CCCEEEHHHHHHHHHHCC
>Mature Secondary Structure
MKEMLIITPGPTAVAENVRLARAKVTTNPDIDLEFYDFYKRTCDKLAQFLKTKNDLRILA
CCCEEEECCCCHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
GEGILGLEAACASLTESGDRVLVLDNGIFGHGFAEFVELYGGQALLLQSSEKEAFDIEIL
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHH
EKFLEKDHDFKYATIVHCDTPSGVLNDLSKICPLLKKYGILTVVDSVAAMGGEDLQVDNW
HHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCE
QIDIALGGSQKVLSAPPGLTIVSISPLAYQAMENRQSPIASFYCNLLTFKDYYEKKWFPY
EEEEEECCCCCEECCCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE
TMPISDIYGLDQAVDNILFDQEILKRHAMIGKATRKAIKNSPLELYLQNGYSNTVSVIKV
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEC
PNGLNDQELLRKMRQDYQVMITGSFDRLAGKVLRIGHMGENARTSKVAYSLYALQKVLEE
CCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHH
SGLKFETSLQEDFLQALK
CCCEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]