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The map label for this gene is pepDA [H]

Identifier: 125623134

GI number: 125623134

Start: 245939

End: 247321

Strand: Reverse

Name: pepDA [H]

Synonym: llmg_0260

Alternate gene names: 125623134

Gene position: 247321-245939 (Counterclockwise)

Preceding gene: 125623138

Following gene: 125623125

Centisome position: 9.78

GC content: 39.26

Gene sequence:

>1383_bases
ATGGCCTGTACAACATTTCTCGTAGGTAAAAAAGCCTCATTAGATGGTAGCACTCTAATTGCACGAAACGAAGATGGGGG
AGATAAACCTAATCCCCAACGTTTTGTTGTCATTAATCCTGAAAATCACCCTAAGCACTATCGCTCTATCGCCACAGCTT
GTGAATTTGACTTACCAGATAATCCCCTATCATATACCTCTACTCCCGATGCTGCCTCTACTTACGGCATTTGGGCTGCA
GCTGGAATTAATAGTGCGAATGTTGCCATGACCGCGACAGAAACCTCCACAACAAATAGTCGAATTTTAGGATTGGACCC
CTACGCTGAAAAAGGACTGGGAGAAGAAGATTTCACAACAATTACTCTTCCTTATATCCAGAGTGCGCGTGAAGGGGTTG
AACGAGTAGGACAACTCTTAGAAAAATATGGAACCTATGAATCAAACGGCATGGCATTTTCCGATAAAGATGAGATTTGG
TGGTTAGAAACACTGGGCGGACATCAGTGGGCTGCTATTCGTATCCCCGATGATGCCTATGTTATTGCACCTAATCGTCT
TAATATTGATTGGTATGATTTTGAAAGCTCTGACACGATTTATTCAACTGGTTTGAAAGAATTTATTGATGACAACAATC
TTAATCCAGACTTTGACGGATATAATCTTCGGCATATTTTTGGTTCAATCACGATTAAAGACACGCGCTACAACAATCCA
CGTGCTTGGTATGTTCAAAACTATTTTTCTCCAGAAACCACAGGAAATGATGACCCTTTTAATCAAGATTTACCTTTCAT
CTGCCAAGCCAATCGTAAAATTTCCATTGAAGAAATTAAGTTTGTCCTGTCAAGTCATTATGAAAATACGGCTTATGACC
CTTATAGTACAACTTCAAGCGCCACAGAACAAAAATTGATTCGACCAATTGGACTCAACCGTAATCTAGAACTTCATGTT
TTGCAAATTCGAGATAAGGTTGCTGAAAATATTGCTGGGATTCACTGGCTTGCCTTTGGTGCCAACACCTTTAATTGTCT
GGTTCCTTTTTATGCCAGAGTAAGCGACACACCAGCTTCTTATCGTGATACAAAGCTGGATTTTGACCCAACAAAAATGT
ATTGGTTGACCACAATGACTGCTGTTCTTGGAGATAGTAATTTCCAAGGCTATGTCGATAAAAGAGATGATTTTGACTTA
AAAACAATGGCCAAATTAAGAGCATTGCAAAATGAAACTGACAAAGCAATCGACAATCAATCCCTTGAAGCAGTTAATGA
AAAACTTGCACAGATTGCTCTGACTGCTCAAACTGAACTTCTTGGTAAAATGGTTATTTCTGGTTCCAATCATATGAAAC
TTCGCTTTGATTTTAATGATTAA

Upstream 100 bases:

>100_bases
AGTTAACTTTAAGTTTTAAATAAATTCAAAAATCTAACCTGTAATTATGCTTAGTATTTATTAATAACAGGCTATTTATC
ACATTTATAAAGGAGTTCTT

Downstream 100 bases:

>100_bases
AAAAATACGGTTAATTAACCGTATTTTTCTTTTTAGCAGTTATCAATGAAGTGTCAATATCCATTGATAGAGTAGTCCAG
CAGTTACAGCACCAACAACC

Product: PepDA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MACTTFLVGKKASLDGSTLIARNEDGGDKPNPQRFVVINPENHPKHYRSIATACEFDLPDNPLSYTSTPDAASTYGIWAA
AGINSANVAMTATETSTTNSRILGLDPYAEKGLGEEDFTTITLPYIQSAREGVERVGQLLEKYGTYESNGMAFSDKDEIW
WLETLGGHQWAAIRIPDDAYVIAPNRLNIDWYDFESSDTIYSTGLKEFIDDNNLNPDFDGYNLRHIFGSITIKDTRYNNP
RAWYVQNYFSPETTGNDDPFNQDLPFICQANRKISIEEIKFVLSSHYENTAYDPYSTTSSATEQKLIRPIGLNRNLELHV
LQIRDKVAENIAGIHWLAFGANTFNCLVPFYARVSDTPASYRDTKLDFDPTKMYWLTTMTAVLGDSNFQGYVDKRDDFDL
KTMAKLRALQNETDKAIDNQSLEAVNEKLAQIALTAQTELLGKMVISGSNHMKLRFDFND

Sequences:

>Translated_460_residues
MACTTFLVGKKASLDGSTLIARNEDGGDKPNPQRFVVINPENHPKHYRSIATACEFDLPDNPLSYTSTPDAASTYGIWAA
AGINSANVAMTATETSTTNSRILGLDPYAEKGLGEEDFTTITLPYIQSAREGVERVGQLLEKYGTYESNGMAFSDKDEIW
WLETLGGHQWAAIRIPDDAYVIAPNRLNIDWYDFESSDTIYSTGLKEFIDDNNLNPDFDGYNLRHIFGSITIKDTRYNNP
RAWYVQNYFSPETTGNDDPFNQDLPFICQANRKISIEEIKFVLSSHYENTAYDPYSTTSSATEQKLIRPIGLNRNLELHV
LQIRDKVAENIAGIHWLAFGANTFNCLVPFYARVSDTPASYRDTKLDFDPTKMYWLTTMTAVLGDSNFQGYVDKRDDFDL
KTMAKLRALQNETDKAIDNQSLEAVNEKLAQIALTAQTELLGKMVISGSNHMKLRFDFND
>Mature_459_residues
ACTTFLVGKKASLDGSTLIARNEDGGDKPNPQRFVVINPENHPKHYRSIATACEFDLPDNPLSYTSTPDAASTYGIWAAA
GINSANVAMTATETSTTNSRILGLDPYAEKGLGEEDFTTITLPYIQSAREGVERVGQLLEKYGTYESNGMAFSDKDEIWW
LETLGGHQWAAIRIPDDAYVIAPNRLNIDWYDFESSDTIYSTGLKEFIDDNNLNPDFDGYNLRHIFGSITIKDTRYNNPR
AWYVQNYFSPETTGNDDPFNQDLPFICQANRKISIEEIKFVLSSHYENTAYDPYSTTSSATEQKLIRPIGLNRNLELHVL
QIRDKVAENIAGIHWLAFGANTFNCLVPFYARVSDTPASYRDTKLDFDPTKMYWLTTMTAVLGDSNFQGYVDKRDDFDLK
TMAKLRALQNETDKAIDNQSLEAVNEKLAQIALTAQTELLGKMVISGSNHMKLRFDFND

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 51789; Mature: 51658

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACTTFLVGKKASLDGSTLIARNEDGGDKPNPQRFVVINPENHPKHYRSIATACEFDLPD
CCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHEECCCCC
NPLSYTSTPDAASTYGIWAAAGINSANVAMTATETSTTNSRILGLDPYAEKGLGEEDFTT
CCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEECCCHHHHCCCCCCCEE
ITLPYIQSAREGVERVGQLLEKYGTYESNGMAFSDKDEIWWLETLGGHQWAAIRIPDDAY
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCEEEEEEECCCCE
VIAPNRLNIDWYDFESSDTIYSTGLKEFIDDNNLNPDFDGYNLRHIFGSITIKDTRYNNP
EECCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCC
RAWYVQNYFSPETTGNDDPFNQDLPFICQANRKISIEEIKFVLSSHYENTAYDPYSTTSS
CEEEEEEECCCCCCCCCCCCCCCCCEEEECCCEECHHHHHHHHHHCCCCCCCCCCCCCCH
ATEQKLIRPIGLNRNLELHVLQIRDKVAENIAGIHWLAFGANTFNCLVPFYARVSDTPAS
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCEEEEEECCCCEEEHHHHHHHCCCCCCC
YRDTKLDFDPTKMYWLTTMTAVLGDSNFQGYVDKRDDFDLKTMAKLRALQNETDKAIDNQ
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCH
SLEAVNEKLAQIALTAQTELLGKMVISGSNHMKLRFDFND
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
>Mature Secondary Structure 
ACTTFLVGKKASLDGSTLIARNEDGGDKPNPQRFVVINPENHPKHYRSIATACEFDLPD
CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHEECCCCC
NPLSYTSTPDAASTYGIWAAAGINSANVAMTATETSTTNSRILGLDPYAEKGLGEEDFTT
CCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEECCCHHHHCCCCCCCEE
ITLPYIQSAREGVERVGQLLEKYGTYESNGMAFSDKDEIWWLETLGGHQWAAIRIPDDAY
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCEEEEEEECCCCE
VIAPNRLNIDWYDFESSDTIYSTGLKEFIDDNNLNPDFDGYNLRHIFGSITIKDTRYNNP
EECCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCC
RAWYVQNYFSPETTGNDDPFNQDLPFICQANRKISIEEIKFVLSSHYENTAYDPYSTTSS
CEEEEEEECCCCCCCCCCCCCCCCCEEEECCCEECHHHHHHHHHHCCCCCCCCCCCCCCH
ATEQKLIRPIGLNRNLELHVLQIRDKVAENIAGIHWLAFGANTFNCLVPFYARVSDTPAS
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCEEEEEECCCCEEEHHHHHHHCCCCCCC
YRDTKLDFDPTKMYWLTTMTAVLGDSNFQGYVDKRDDFDLKTMAKLRALQNETDKAIDNQ
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCH
SLEAVNEKLAQIALTAQTELLGKMVISGSNHMKLRFDFND
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]