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The map label for this gene is rgpE [C]

Identifier: 125623093

GI number: 125623093

Start: 205049

End: 206005

Strand: Direct

Name: rgpE [C]

Synonym: llmg_0216

Alternate gene names: 125623093

Gene position: 205049-206005 (Clockwise)

Preceding gene: 125623092

Following gene: 125623094

Centisome position: 8.11

GC content: 31.66

Gene sequence:

>957_bases
ATGGACAAAAAAGTATCAGTCGTAGTGACATGCTACAATCACGAAAAATTTATTGAAGAATGCTTACGTAGCATTTTTGC
GCAAACTCATCAGAACATTGAACTTCTAGTTTTTAATGATGGGTCGACAGATGATTCTGGTGCAGTAATTTCAAAAGTGC
TTGAAGAATCACCATTTGCTGAAACTCATTATTTTTCAGGAGAAAATAGAGGTCTAGCTTTTGTACGAAATGATGCTTTA
AGTAAGAGCACAGGCGATTTTTTACTTTTTGTTGATAGTGATAATTTTCTTAATGCTGACCATATTGAAAAGTTACTGAC
AGAGCTGTTAGCAACAGATTCAGATATTGCCTATTGTCAGCTATGGGATTTTAATGCTCAAAAAGACCTTCTTCGCCCAG
ATTTAGAATATAGCTTTAAAAAACAACTAGAGGGAAATCTGATTGATGCTTCGTCATTGGTTAGGACCTCAAAAATTGCT
GACATAAAATTTGATGAATCTTTAAATAATAAAACACTTGAAGATTATGATTTTTGGTTAGGATTAATCATTAATAATGG
AGCAAAACCTATTTTTGTTTCAAATACAAAATTGAATTATCGAGTTTTAGAACAATCCTTGAGTCAAAGAGGAAATTGGG
AAAACTATTATCAATCGTATTTTTATATTACCAATAAGTACAGTAAAAAAATTCCGTCAGAACTGATAGAAGCGCTCCAA
AACAACTTACTACTTTGGGTAGATAATTATCAAAACTTACAAATTGATAGAGACAGACAACTTGCTGATAAAGCTCAAGA
GTATCTTGAACAAGAAGAAGCGATGAAAAAAACAATAGCTGACAAAGATACCCATATTGCTAATCAAGAAAAAGTGATTT
CTGAAATTACTAATTCTTTTGCATATCGGCTAATAAATAAAGTGATACATCCCTTAGGAAAGAAGAATGAACAATAA

Upstream 100 bases:

>100_bases
TTGAATTTGAGTGTTACAATGCTCAGATCTTACCATTTACAACTTCCGATGGATGAATATCGTTCAGGAATAGAACATTA
TATCTTTAAGTAGGTGAATT

Downstream 100 bases:

>100_bases
ATTATTACTATACGTACATTTTAACCGAAATAACGAGTTGAGTGACCACGTTATTTACCAATTGAAACATTTACGACAAA
ATTTTGATGAAGTTTTCTTC

Product: glycosyltransferase RgpE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDKKVSVVVTCYNHEKFIEECLRSIFAQTHQNIELLVFNDGSTDDSGAVISKVLEESPFAETHYFSGENRGLAFVRNDAL
SKSTGDFLLFVDSDNFLNADHIEKLLTELLATDSDIAYCQLWDFNAQKDLLRPDLEYSFKKQLEGNLIDASSLVRTSKIA
DIKFDESLNNKTLEDYDFWLGLIINNGAKPIFVSNTKLNYRVLEQSLSQRGNWENYYQSYFYITNKYSKKIPSELIEALQ
NNLLLWVDNYQNLQIDRDRQLADKAQEYLEQEEAMKKTIADKDTHIANQEKVISEITNSFAYRLINKVIHPLGKKNEQ

Sequences:

>Translated_318_residues
MDKKVSVVVTCYNHEKFIEECLRSIFAQTHQNIELLVFNDGSTDDSGAVISKVLEESPFAETHYFSGENRGLAFVRNDAL
SKSTGDFLLFVDSDNFLNADHIEKLLTELLATDSDIAYCQLWDFNAQKDLLRPDLEYSFKKQLEGNLIDASSLVRTSKIA
DIKFDESLNNKTLEDYDFWLGLIINNGAKPIFVSNTKLNYRVLEQSLSQRGNWENYYQSYFYITNKYSKKIPSELIEALQ
NNLLLWVDNYQNLQIDRDRQLADKAQEYLEQEEAMKKTIADKDTHIANQEKVISEITNSFAYRLINKVIHPLGKKNEQ
>Mature_318_residues
MDKKVSVVVTCYNHEKFIEECLRSIFAQTHQNIELLVFNDGSTDDSGAVISKVLEESPFAETHYFSGENRGLAFVRNDAL
SKSTGDFLLFVDSDNFLNADHIEKLLTELLATDSDIAYCQLWDFNAQKDLLRPDLEYSFKKQLEGNLIDASSLVRTSKIA
DIKFDESLNNKTLEDYDFWLGLIINNGAKPIFVSNTKLNYRVLEQSLSQRGNWENYYQSYFYITNKYSKKIPSELIEALQ
NNLLLWVDNYQNLQIDRDRQLADKAQEYLEQEEAMKKTIADKDTHIANQEKVISEITNSFAYRLINKVIHPLGKKNEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=127, Percent_Identity=31.496062992126, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1790044, Length=122, Percent_Identity=31.9672131147541, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787259, Length=109, Percent_Identity=26.605504587156, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36761; Mature: 36761

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKVSVVVTCYNHEKFIEECLRSIFAQTHQNIELLVFNDGSTDDSGAVISKVLEESPFA
CCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCC
ETHYFSGENRGLAFVRNDALSKSTGDFLLFVDSDNFLNADHIEKLLTELLATDSDIAYCQ
HHEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
LWDFNAQKDLLRPDLEYSFKKQLEGNLIDASSLVRTSKIADIKFDESLNNKTLEDYDFWL
EECCCCHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHCCEEECCCCCCCCCHHHHHEE
GLIINNGAKPIFVSNTKLNYRVLEQSLSQRGNWENYYQSYFYITNKYSKKIPSELIEALQ
EEEEECCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHEEEEECCHHHCCHHHHHHHHH
NNLLLWVDNYQNLQIDRDRQLADKAQEYLEQEEAMKKTIADKDTHIANQEKVISEITNSF
CCEEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHH
AYRLINKVIHPLGKKNEQ
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDKKVSVVVTCYNHEKFIEECLRSIFAQTHQNIELLVFNDGSTDDSGAVISKVLEESPFA
CCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCC
ETHYFSGENRGLAFVRNDALSKSTGDFLLFVDSDNFLNADHIEKLLTELLATDSDIAYCQ
HHEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
LWDFNAQKDLLRPDLEYSFKKQLEGNLIDASSLVRTSKIADIKFDESLNNKTLEDYDFWL
EECCCCHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHCCEEECCCCCCCCCHHHHHEE
GLIINNGAKPIFVSNTKLNYRVLEQSLSQRGNWENYYQSYFYITNKYSKKIPSELIEALQ
EEEEECCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHEEEEECCHHHCCHHHHHHHHH
NNLLLWVDNYQNLQIDRDRQLADKAQEYLEQEEAMKKTIADKDTHIANQEKVISEITNSF
CCEEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHH
AYRLINKVIHPLGKKNEQ
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]