Click here to switch to the map view.

The map label for this gene is yutD [H]

Identifier: 125623070

GI number: 125623070

Start: 181659

End: 182426

Strand: Direct

Name: yutD [H]

Synonym: llmg_0193

Alternate gene names: 125623070

Gene position: 181659-182426 (Clockwise)

Preceding gene: 125623069

Following gene: 125623071

Centisome position: 7.18

GC content: 34.51

Gene sequence:

>768_bases
ATGGCTAAAGTAATAGATGAAACTAAATTAAATTATAACAAGTACCCTGGGGAACATGTTATGGCATCAGGAGAAGTCGT
TCAAGTTGGAAAACGAACTTTTCACATTGTTCATAATTATCGAGAGGCTTTTGACGCGGAAAAATTGGAGCAACGTTTTT
CTGATGTTTTAGATAAATATGATTATATCGTTGGAGATTGGGGCTTTGAACAATTACGTTTAAAAGGTTTTTTCTCAACG
AGTCGCAAAAAAATGTTAGCAGATAATAAAATTGACCATCTTGAAGATTATATCAATGAGTATTGTAATTATGGTTGTGC
TTACTTTGTCTTACGTCGAATTCGGACAAGGGACGAAGCTTTTGTTTCTGAAAAACTTTTTACCGAAAAAGAATTAAAAC
AAGGTTTAGATAAGCCACGTCGCAAAAGAAATCGTAATCGAAATCGAGCCCGTGATGAGCAAAATGTGAATTCTAAAGAT
GAGAAACGTTCAGAAAACGCCTCAGAAGCTCGGAAAGATTTTAAAATTCGTGATAAATCTGCTGACAGAAAAGCAAAACC
AACTGACAAAAAGATAAATAAGCCGCTCAGCAAGAAATCGCAAGAAGGACGAGCTGACAAAGCAGTCAATAAAAAAGCTA
CTTCTTCCAAAGAATCTGATAAAAAATTTACAATGAAAAAACGAAATCCACGGAAAAAAGTTGAACAAACAGAGTCTAAA
AATCAAGGGAATCAAGGCTTTGTTATTCGTAATCGGAAGAAAGACTAA

Upstream 100 bases:

>100_bases
CATTACTGAAAAAATTAGGTCAGTCGGAAATTTTATTTCCCTATTTTTTACGGGAAATTGTAGCAGAATATTTTAAAAAT
AAATAGAAATAGAAAAATTA

Downstream 100 bases:

>100_bases
AGCTTTGTAAAAGTTATTTGACGGTCAGTGAACTTGTCAAAGATTAAAAATTATCGTAGAATTAACATTTATGGATTCCT
TAAACATTTGGAATTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MAKVIDETKLNYNKYPGEHVMASGEVVQVGKRTFHIVHNYREAFDAEKLEQRFSDVLDKYDYIVGDWGFEQLRLKGFFST
SRKKMLADNKIDHLEDYINEYCNYGCAYFVLRRIRTRDEAFVSEKLFTEKELKQGLDKPRRKRNRNRNRARDEQNVNSKD
EKRSENASEARKDFKIRDKSADRKAKPTDKKINKPLSKKSQEGRADKAVNKKATSSKESDKKFTMKKRNPRKKVEQTESK
NQGNQGFVIRNRKKD

Sequences:

>Translated_255_residues
MAKVIDETKLNYNKYPGEHVMASGEVVQVGKRTFHIVHNYREAFDAEKLEQRFSDVLDKYDYIVGDWGFEQLRLKGFFST
SRKKMLADNKIDHLEDYINEYCNYGCAYFVLRRIRTRDEAFVSEKLFTEKELKQGLDKPRRKRNRNRNRARDEQNVNSKD
EKRSENASEARKDFKIRDKSADRKAKPTDKKINKPLSKKSQEGRADKAVNKKATSSKESDKKFTMKKRNPRKKVEQTESK
NQGNQGFVIRNRKKD
>Mature_254_residues
AKVIDETKLNYNKYPGEHVMASGEVVQVGKRTFHIVHNYREAFDAEKLEQRFSDVLDKYDYIVGDWGFEQLRLKGFFSTS
RKKMLADNKIDHLEDYINEYCNYGCAYFVLRRIRTRDEAFVSEKLFTEKELKQGLDKPRRKRNRNRNRARDEQNVNSKDE
KRSENASEARKDFKIRDKSADRKAKPTDKKINKPLSKKSQEGRADKAVNKKATSSKESDKKFTMKKRNPRKKVEQTESKN
QGNQGFVIRNRKKD

Specific function: Unknown

COG id: COG4470

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009370 [H]

Pfam domain/function: PF06265 DUF1027 [H]

EC number: NA

Molecular weight: Translated: 30130; Mature: 29999

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVIDETKLNYNKYPGEHVMASGEVVQVGKRTFHIVHNYREAFDAEKLEQRFSDVLDKY
CCCCCCHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DYIVGDWGFEQLRLKGFFSTSRKKMLADNKIDHLEDYINEYCNYGCAYFVLRRIRTRDEA
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FVSEKLFTEKELKQGLDKPRRKRNRNRNRARDEQNVNSKDEKRSENASEARKDFKIRDKS
HHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCCCCC
ADRKAKPTDKKINKPLSKKSQEGRADKAVNKKATSSKESDKKFTMKKRNPRKKVEQTESK
CCCCCCCCHHHHCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
NQGNQGFVIRNRKKD
CCCCCCEEECCCCCC
>Mature Secondary Structure 
AKVIDETKLNYNKYPGEHVMASGEVVQVGKRTFHIVHNYREAFDAEKLEQRFSDVLDKY
CCCCCHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DYIVGDWGFEQLRLKGFFSTSRKKMLADNKIDHLEDYINEYCNYGCAYFVLRRIRTRDEA
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FVSEKLFTEKELKQGLDKPRRKRNRNRNRARDEQNVNSKDEKRSENASEARKDFKIRDKS
HHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCCCCC
ADRKAKPTDKKINKPLSKKSQEGRADKAVNKKATSSKESDKKFTMKKRNPRKKVEQTESK
CCCCCCCCHHHHCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
NQGNQGFVIRNRKKD
CCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]