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The map label for this gene is yxkH [H]

Identifier: 125622991

GI number: 125622991

Start: 104640

End: 105596

Strand: Direct

Name: yxkH [H]

Synonym: llmg_0112

Alternate gene names: 125622991

Gene position: 104640-105596 (Clockwise)

Preceding gene: 125622990

Following gene: 125622992

Centisome position: 4.14

GC content: 37.51

Gene sequence:

>957_bases
ATGAAAAAACGTGTACAACGTAACAAAAAACGAATTCGCTGGGCTTCAGTCCTCACAGTTTTCGTTCTTTTAATTGGAAT
AATTGCAATTGCTTTTGCTGCCGTTCATCTGCTAAGTCCTAAAGTAAATACTAGCCAAAAAAGTAGTCAAACTTCAAGAC
AAGAAAAAACCAAAAGCACTGTCCCATCTAGTTCTTCTCAACCTAAAGAAACAAAATGGCTCACTGGAACTAACGAAAAT
CAATTGCCTATTTTGATGTTCCATTATGTCACTTCAAGAGCTGACCAATTGCCACAAGATAGTAACAACATCAATATTGT
TACCTTTGAAAATGAGTTAAAAGCACTGAAAAGTCAAGGTTATACGATAGTCAGTGGAACGGATGCCCAAAAAATTCTGA
CGACCAAAGAAAAACCTAGTGACAAAATGGTTTGGCTTACTTTTGATGACGGTTCAGTGACCATGTATACTGATATTTTC
CCATTACTGAAAAAATATAATATGCATGCTACGAATTTCATTATCACAGGATTTGTGAATAAAGCTCAAGGGGGAATTTT
GAGTTGGGAGCAAATCAAAGAAATGAAAGCAAGCGGACTTGTTGACTTTGGAAGTCATACAGTCAGTCATCCTGATTTAG
GAACGCAAACTTTAGAGGCCCAACGAACAGAGCTAGAACAATCAAAAGCTGACCTTGACAAAAATCTGAACCAGCAAACC
AATATGATTTGTTATCCAGCCGGTGGCTACAACCAAAATACCCTAAGCTTATCAACTGAATTAGGCTATAAATTTGGACT
TCTTGATCCAGGACGTAATGGTGCTGTCGCCCAAGCAGCCAAAGAAAGTGATGGTCTATTAACACTGCCACGCTTTAGAA
TGATGAGTAGCACCACTGCTGAAGAAATGATGCAAATGATTCAACCAGCGACTGATTATAATGAAAAAAATAAATAA

Upstream 100 bases:

>100_bases
GAATATTGCGAGCAGAAACAGCTCCCTTATACGCTTTATCAAGTATCTCAGCTTATTTTGAATTATTATAAATAAAGAAA
AAATTTTTAGGAAATCGATT

Downstream 100 bases:

>100_bases
ACTCCGAATAATCGGAGTTTTATCTTTATATTTTTAAGAGTCATCCTTTTGCTTAACTTGCAAATGTGATAGAATAGATT
AAATTAAGTGAAATCAACCT

Product: putative xylanase/chitin deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKKRVQRNKKRIRWASVLTVFVLLIGIIAIAFAAVHLLSPKVNTSQKSSQTSRQEKTKSTVPSSSSQPKETKWLTGTNEN
QLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKSQGYTIVSGTDAQKILTTKEKPSDKMVWLTFDDGSVTMYTDIF
PLLKKYNMHATNFIITGFVNKAQGGILSWEQIKEMKASGLVDFGSHTVSHPDLGTQTLEAQRTELEQSKADLDKNLNQQT
NMICYPAGGYNQNTLSLSTELGYKFGLLDPGRNGAVAQAAKESDGLLTLPRFRMMSSTTAEEMMQMIQPATDYNEKNK

Sequences:

>Translated_318_residues
MKKRVQRNKKRIRWASVLTVFVLLIGIIAIAFAAVHLLSPKVNTSQKSSQTSRQEKTKSTVPSSSSQPKETKWLTGTNEN
QLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKSQGYTIVSGTDAQKILTTKEKPSDKMVWLTFDDGSVTMYTDIF
PLLKKYNMHATNFIITGFVNKAQGGILSWEQIKEMKASGLVDFGSHTVSHPDLGTQTLEAQRTELEQSKADLDKNLNQQT
NMICYPAGGYNQNTLSLSTELGYKFGLLDPGRNGAVAQAAKESDGLLTLPRFRMMSSTTAEEMMQMIQPATDYNEKNK
>Mature_318_residues
MKKRVQRNKKRIRWASVLTVFVLLIGIIAIAFAAVHLLSPKVNTSQKSSQTSRQEKTKSTVPSSSSQPKETKWLTGTNEN
QLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKSQGYTIVSGTDAQKILTTKEKPSDKMVWLTFDDGSVTMYTDIF
PLLKKYNMHATNFIITGFVNKAQGGILSWEQIKEMKASGLVDFGSHTVSHPDLGTQTLEAQRTELEQSKADLDKNLNQQT
NMICYPAGGYNQNTLSLSTELGYKFGLLDPGRNGAVAQAAKESDGLLTLPRFRMMSSTTAEEMMQMIQPATDYNEKNK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=257, Percent_Identity=23.7354085603113, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 35512; Mature: 35512

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRVQRNKKRIRWASVLTVFVLLIGIIAIAFAAVHLLSPKVNTSQKSSQTSRQEKTKST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
VPSSSSQPKETKWLTGTNENQLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKSQG
CCCCCCCCCCCEEECCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHCC
YTIVSGTDAQKILTTKEKPSDKMVWLTFDDGSVTMYTDIFPLLKKYNMHATNFIITGFVN
CEEEECCCHHHHHCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCCCHHEEEEEEEHH
KAQGGILSWEQIKEMKASGLVDFGSHTVSHPDLGTQTLEAQRTELEQSKADLDKNLNQQT
HCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
NMICYPAGGYNQNTLSLSTELGYKFGLLDPGRNGAVAQAAKESDGLLTLPRFRMMSSTTA
CEEEECCCCCCCCEEEEEHHCCCEEECCCCCCCCHHHHHHHCCCCEEECCHHHHHHCCCH
EEMMQMIQPATDYNEKNK
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKRVQRNKKRIRWASVLTVFVLLIGIIAIAFAAVHLLSPKVNTSQKSSQTSRQEKTKST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
VPSSSSQPKETKWLTGTNENQLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKSQG
CCCCCCCCCCCEEECCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHCC
YTIVSGTDAQKILTTKEKPSDKMVWLTFDDGSVTMYTDIFPLLKKYNMHATNFIITGFVN
CEEEECCCHHHHHCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCCCHHEEEEEEEHH
KAQGGILSWEQIKEMKASGLVDFGSHTVSHPDLGTQTLEAQRTELEQSKADLDKNLNQQT
HCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
NMICYPAGGYNQNTLSLSTELGYKFGLLDPGRNGAVAQAAKESDGLLTLPRFRMMSSTTA
CEEEECCCCCCCCEEEEEHHCCCEEECCCCCCCCHHHHHHHCCCCEEECCHHHHHHCCCH
EEMMQMIQPATDYNEKNK
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]