| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486540
Identifier: 124486540
GI number: 124486540
Start: 1775181
End: 1775870
Strand: Reverse
Name: 124486540
Synonym: Mlab_1728
Alternate gene names: NA
Gene position: 1775870-1775181 (Counterclockwise)
Preceding gene: 124486541
Following gene: 124486539
Centisome position: 98.39
GC content: 44.78
Gene sequence:
>690_bases ATGACTGAACAAACCAAAAATGCCCAACGAAGTGTCATCTGCATGGCACTCATCTATCTACTGCCGCTATGCATATTTCC CTCACCTTTTTTATGGAGTGTCTCCCGGCCGATATTTCTGTCAAACCCAATTGCCGATGGGCTGTGTGCGAGTCTGCTGT TTATTCTGCCGATTGTAGCTCTGATAGGGGTGATAACGTATAAAAAAACATTCGGCAAGGAAAAAACGACATGGTTCACG GTTCTTTTAATTGCCCTTGCTTTTTTGCTCGTCATCAATACAGTAATGGGCATCATGTATCTCATCTATGAAACTTTGCT TGGGACTCCTGCTTGGAATACCTTCATCTATTTCATCCTGATTCTTGCCCCTCTCCTCTCTCTTGCTGTCCCGAAGCTCT GCGAAGCACGAAAACCGCAGAAGATCCTGTCGGGAGTCTCGAAAGGATTTGCTGTATTCAGCATCTTCTATCTGATCTAT GCTATGTTTCGTGGAATAGCAGGAGATGCATACGATGTTGTTGTCCCCGGCATGCCTCCCGCTTATCCTTGGTATATATC CCAGGTGTTTATGTTGAGCCTTAGCATAATCTGGGCCCTCTTCGGTCTCGCGGTTGGAGCCTGTATGATTTGGTTGTGTC GAAAATCTGAAAATGATGTATGCATGTGTAACGAATGTGATGAAAAATGA
Upstream 100 bases:
>100_bases CAGGCTCAATGTATTGATAATAGATGAGGGAAAAGGTGTAATTATAGATCATAGAAACCATCTCCACAATCATAAACAAT TTCATACACCTTGCCTGATC
Downstream 100 bases:
>100_bases ACAAAGACCCAAATCACGCGAAAAAATATGGGTATATATTATTGGTAGTTCTCATTCTCTTACTGTTCATACTTTTTGCC CCTCTTATGGTGGAATCCAC
Product: aconitate hydratase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTEQTKNAQRSVICMALIYLLPLCIFPSPFLWSVSRPIFLSNPIADGLCASLLFILPIVALIGVITYKKTFGKEKTTWFT VLLIALAFLLVINTVMGIMYLIYETLLGTPAWNTFIYFILILAPLLSLAVPKLCEARKPQKILSGVSKGFAVFSIFYLIY AMFRGIAGDAYDVVVPGMPPAYPWYISQVFMLSLSIIWALFGLAVGACMIWLCRKSENDVCMCNECDEK
Sequences:
>Translated_229_residues MTEQTKNAQRSVICMALIYLLPLCIFPSPFLWSVSRPIFLSNPIADGLCASLLFILPIVALIGVITYKKTFGKEKTTWFT VLLIALAFLLVINTVMGIMYLIYETLLGTPAWNTFIYFILILAPLLSLAVPKLCEARKPQKILSGVSKGFAVFSIFYLIY AMFRGIAGDAYDVVVPGMPPAYPWYISQVFMLSLSIIWALFGLAVGACMIWLCRKSENDVCMCNECDEK >Mature_228_residues TEQTKNAQRSVICMALIYLLPLCIFPSPFLWSVSRPIFLSNPIADGLCASLLFILPIVALIGVITYKKTFGKEKTTWFTV LLIALAFLLVINTVMGIMYLIYETLLGTPAWNTFIYFILILAPLLSLAVPKLCEARKPQKILSGVSKGFAVFSIFYLIYA MFRGIAGDAYDVVVPGMPPAYPWYISQVFMLSLSIIWALFGLAVGACMIWLCRKSENDVCMCNECDEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25600; Mature: 25469
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQTKNAQRSVICMALIYLLPLCIFPSPFLWSVSRPIFLSNPIADGLCASLLFILPIVA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHH LIGVITYKKTFGKEKTTWFTVLLIALAFLLVINTVMGIMYLIYETLLGTPAWNTFIYFIL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ILAPLLSLAVPKLCEARKPQKILSGVSKGFAVFSIFYLIYAMFRGIAGDAYDVVVPGMPP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC AYPWYISQVFMLSLSIIWALFGLAVGACMIWLCRKSENDVCMCNECDEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure TEQTKNAQRSVICMALIYLLPLCIFPSPFLWSVSRPIFLSNPIADGLCASLLFILPIVA CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHH LIGVITYKKTFGKEKTTWFTVLLIALAFLLVINTVMGIMYLIYETLLGTPAWNTFIYFIL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ILAPLLSLAVPKLCEARKPQKILSGVSKGFAVFSIFYLIYAMFRGIAGDAYDVVVPGMPP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC AYPWYISQVFMLSLSIIWALFGLAVGACMIWLCRKSENDVCMCNECDEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA