Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486539

Identifier: 124486539

GI number: 124486539

Start: 1774759

End: 1775184

Strand: Reverse

Name: 124486539

Synonym: Mlab_1727

Alternate gene names: NA

Gene position: 1775184-1774759 (Counterclockwise)

Preceding gene: 124486540

Following gene: 124486538

Centisome position: 98.35

GC content: 37.79

Gene sequence:

>426_bases
ATGAACAAAGACCCAAATCACGCGAAAAAATATGGGTATATATTATTGGTAGTTCTCATTCTCTTACTGTTCATACTTTT
TGCCCCTCTTATGGTGGAATCCACCGGTATCTTGGACAGTAAGTCAATGATATTAACCTATTCATCATATCCTGAAAAAC
CGATCAACCACGTATGGAACGAATCCGGATATGCGATATTGAATATTACTGATGATGATTTCGAAAAATATCCTGAGATA
AAGGAGTTGTTTCTGACTAAAGATACCAGTATAAAAAAATCGGACCCTAGAACAGATAACCCTGTATTGAATAGTGTCCA
GGTTCTGACTCGACAACGAATCGATGAGATCCGGGAAAAATACTGTATTCACAGAATTCTCTACTGGGAAGGAGAGTATT
ATCAGGCAGGCATCCCGTATTCATAA

Upstream 100 bases:

>100_bases
TAATCTGGGCCCTCTTCGGTCTCGCGGTTGGAGCCTGTATGATTTGGTTGTGTCGAAAATCTGAAAATGATGTATGCATG
TGTAACGAATGTGATGAAAA

Downstream 100 bases:

>100_bases
TTTATTCTGGTTCTTTGATGAATCGAGTGGAAAATAGATGTTTTGAATCTATCATCTCCCTCATTATTTGTTCCCTATAG
AAATTGACCTGTTTTCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MNKDPNHAKKYGYILLVVLILLLFILFAPLMVESTGILDSKSMILTYSSYPEKPINHVWNESGYAILNITDDDFEKYPEI
KELFLTKDTSIKKSDPRTDNPVLNSVQVLTRQRIDEIREKYCIHRILYWEGEYYQAGIPYS

Sequences:

>Translated_141_residues
MNKDPNHAKKYGYILLVVLILLLFILFAPLMVESTGILDSKSMILTYSSYPEKPINHVWNESGYAILNITDDDFEKYPEI
KELFLTKDTSIKKSDPRTDNPVLNSVQVLTRQRIDEIREKYCIHRILYWEGEYYQAGIPYS
>Mature_141_residues
MNKDPNHAKKYGYILLVVLILLLFILFAPLMVESTGILDSKSMILTYSSYPEKPINHVWNESGYAILNITDDDFEKYPEI
KELFLTKDTSIKKSDPRTDNPVLNSVQVLTRQRIDEIREKYCIHRILYWEGEYYQAGIPYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16510; Mature: 16510

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDPNHAKKYGYILLVVLILLLFILFAPLMVESTGILDSKSMILTYSSYPEKPINHVWN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHC
ESGYAILNITDDDFEKYPEIKELFLTKDTSIKKSDPRTDNPVLNSVQVLTRQRIDEIREK
CCCEEEEEECCHHHHHCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YCIHRILYWEGEYYQAGIPYS
HHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure
MNKDPNHAKKYGYILLVVLILLLFILFAPLMVESTGILDSKSMILTYSSYPEKPINHVWN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHC
ESGYAILNITDDDFEKYPEIKELFLTKDTSIKKSDPRTDNPVLNSVQVLTRQRIDEIREK
CCCEEEEEECCHHHHHCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YCIHRILYWEGEYYQAGIPYS
HHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA