| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486534
Identifier: 124486534
GI number: 124486534
Start: 1769871
End: 1770710
Strand: Reverse
Name: 124486534
Synonym: Mlab_1722
Alternate gene names: NA
Gene position: 1770710-1769871 (Counterclockwise)
Preceding gene: 124486538
Following gene: 124486533
Centisome position: 98.1
GC content: 49.88
Gene sequence:
>840_bases ATGGATTCTCTTATCAACTGGCAGGCTCTGCAAAAACTGAGTATGCCGCAAATGCCTTCGCAGCAAAAGAACGGAGAAAA TATGTGGGACACGGCCGCGACCATGTACAACAAAATGGCGGCCCTTGAAAAATCTCACACATTGAACCAGATCAACGCCA TCCCTCTCAGACCAACGGACACAGTTCTTGATATGGGATGCGGACCAGGCCGTATCACGGTCCCCGTTGCTCAGCGTGTG TCCTCGGTTACCGCCGCCGATTCTGCAGAGTCGATGCTTGCTTACTGTAAGGAGAACGTAAAAAAGGCGAATCTTACAAA CGTTGATCCGGTATTTCTCGACTTCAATGATGCCGTTATCGGTGAAAACCTTAAAAAACACGATGTGGCAATCTGTTCAC GTTCCGCCGGTCTTCAGGATTTGAAAAAGCTGAGCTCCTTTGCAGACAGGATCGCAGCTATCGTGATCTGGGCAAATGCC CCAAGTATCCCGGAACTTCTCGAAAAACTGTTTACCGGAACCGGCAGCGAAGGCCGCAGACCCCATCCCGGAGGAAGAGA TCGGCGGGTTGGCTACAATCTTTTCTATAATATCGTTTACGATCTTGGGTACGAACCGAACGTACATGTCGTCGATGACG GATTTACCTGCGAGTACGCCTCCCGCGAAGAGGCCTACAGAGATCTGTCGATCCTTGGCCAGATCGATCCGGATAAAACG GATGTGTTCCGGCGCAATGTGGATCAGTTCCTCACAGAAAATGCAAACGGTGGATATACTTTCCTTTTGGAGACCAGATC TGCGGTCATCTGGTGGGACGTCTCTTCAAAAACCTATTAA
Upstream 100 bases:
>100_bases CACCATGTTAGCATAATATGATTTATTTTTCAATTAATTTGCGAATAGTATTTATCAGTTATCCGACAAATCAATTCTAT CAATTCTGGAGTTTAACATT
Downstream 100 bases:
>100_bases CTTCCCGCTCTTTTTTTTCTTTTCGCTGCTGAAAATAGTTTTGCCTCGAAAATCGCAATTTGCGGGAATAGTGGGAATAT TGGAATATGTAATATGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Ribosomal RNA Adenine Dimethylase; SAM-Dependent Methyltransferase; Serine Protease; Cyclopropane-Fatty-Acyl-Phospholipid Synthase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTDTVLDMGCGPGRITVPVAQRV SSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVIGENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANA PSIPELLEKLFTGTGSEGRRPHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY
Sequences:
>Translated_279_residues MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTDTVLDMGCGPGRITVPVAQRV SSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVIGENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANA PSIPELLEKLFTGTGSEGRRPHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY >Mature_279_residues MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTDTVLDMGCGPGRITVPVAQRV SSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVIGENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANA PSIPELLEKLFTGTGSEGRRPHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31106; Mature: 31106
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTD CCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TVLDMGCGPGRITVPVAQRVSSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVI HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH GENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANAPSIPELLEKLFTGTGSEGRR CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCC PHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHHHCCCCCCHH DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCC >Mature Secondary Structure MDSLINWQALQKLSMPQMPSQQKNGENMWDTAATMYNKMAALEKSHTLNQINAIPLRPTD CCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TVLDMGCGPGRITVPVAQRVSSVTAADSAESMLAYCKENVKKANLTNVDPVFLDFNDAVI HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH GENLKKHDVAICSRSAGLQDLKKLSSFADRIAAIVIWANAPSIPELLEKLFTGTGSEGRR CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCC PHPGGRDRRVGYNLFYNIVYDLGYEPNVHVVDDGFTCEYASREEAYRDLSILGQIDPDKT CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHHHCCCCCCHH DVFRRNVDQFLTENANGGYTFLLETRSAVIWWDVSSKTY HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA