Click here to switch to the map view.

The map label for this gene is 124486533

Identifier: 124486533

GI number: 124486533

Start: 1768588

End: 1769643

Strand: Reverse

Name: 124486533

Synonym: Mlab_1721

Alternate gene names: NA

Gene position: 1769643-1768588 (Counterclockwise)

Preceding gene: 124486534

Following gene: 124486532

Centisome position: 98.04

GC content: 47.92

Gene sequence:

>1056_bases
ATGATGAAAAAATTTCTATTAATTCTCGTATCTCTGGTTCTGATACTTACCATTTCAGCAGCAGGGTGTGTCGATGTCTC
TCAATCTCCCTCAAATCGGACCATTACCGATATGAACGGTGCCGAGGTTGTCATTCCTGCAGAAATTAACACGGTTGTGA
ATTTATGGCCGGCATCCAACTCCGTTATGCTCTGTATGGGTGCGGGCGATAAACTCATCGGAACGACATCCTTTACCAAA
TCGCTCTACTGGTCCCAAAAGGTGTATCCGGCAATCGTCGATGTACCGGTTGGAACCGATAATGTTGAGGAACTTCTCGC
TCTCTCTCCCGACTTAATCATCACGCCTCAGAAAGCAACTGCCGAAAAACTCCGTGCAGCCGGTCTTCCTGCTATCTGTC
TGATGTTCAGTGATTATGACACCATGAAACAGGCATTCGGCATCCTTGGCGAAGCGTTAGGCGGAGACTATGTTGAAAAA
GCTGCAAAGTGGTCCGATCTTGTGGACGAGAACAAAGCCCGTGTCCAGGCAGCAATCGGCGACATCCCTGAAGATGAAAA
ACCCGTGGTTTATTACATCCAGGGTCAGTCGAATCAGGGTCTTTATGCGACCTTCTCTGCAAACTCCATTATGGAGGACT
GGACGGAGACCGCAGGAGGCATTTTTGCATCAACCCGTCTTAATCTGACCGGCAATACGGCATCTGCAGAGGAAGTACTC
GCCTTGAATCCTGATGTCATTATTATCGGCGGCCCTGCTCAGCATGAACTCTATGATGAACTGATGGCTTCTGAGGAATG
GAAAGAGATCAACGCCGTCAAAAACGGTCGTGTTTATACGAATCCAAACGGTCTTTTCCCCTGGGAGCGGTTCGGTATGG
AAAGCGCTCTGCAGATTCTCTTCGCTGCATCGGTGATCCACCCCGATTTATTCCAGGTTGACATGGTATCTGAAGTTCAG
GACTTCTACAAAGAATTTGTTGGCATTGATCTAACAAAAGAAGAAGCTCAGAACATGATCAACGGTTACGGACCGAACGG
CGAAACGTATACGTGA

Upstream 100 bases:

>100_bases
TTTCAAAATTGACTGCAAAAAATTAATATTATTTAATTAACAGTTTTATTAAAATGAGTTAACTATATCTATGGCACAAA
ACTTAACATAAAAAGATAAA

Downstream 100 bases:

>100_bases
GAATAGATAATGGGAAATGATATTGCCGGAAATCTGAGCGGCAGAATAATATCCAACGCAAAATACCGGATGATCTTCAT
CGGTCTGGTCATAATGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MMKKFLLILVSLVLILTISAAGCVDVSQSPSNRTITDMNGAEVVIPAEINTVVNLWPASNSVMLCMGAGDKLIGTTSFTK
SLYWSQKVYPAIVDVPVGTDNVEELLALSPDLIITPQKATAEKLRAAGLPAICLMFSDYDTMKQAFGILGEALGGDYVEK
AAKWSDLVDENKARVQAAIGDIPEDEKPVVYYIQGQSNQGLYATFSANSIMEDWTETAGGIFASTRLNLTGNTASAEEVL
ALNPDVIIIGGPAQHELYDELMASEEWKEINAVKNGRVYTNPNGLFPWERFGMESALQILFAASVIHPDLFQVDMVSEVQ
DFYKEFVGIDLTKEEAQNMINGYGPNGETYT

Sequences:

>Translated_351_residues
MMKKFLLILVSLVLILTISAAGCVDVSQSPSNRTITDMNGAEVVIPAEINTVVNLWPASNSVMLCMGAGDKLIGTTSFTK
SLYWSQKVYPAIVDVPVGTDNVEELLALSPDLIITPQKATAEKLRAAGLPAICLMFSDYDTMKQAFGILGEALGGDYVEK
AAKWSDLVDENKARVQAAIGDIPEDEKPVVYYIQGQSNQGLYATFSANSIMEDWTETAGGIFASTRLNLTGNTASAEEVL
ALNPDVIIIGGPAQHELYDELMASEEWKEINAVKNGRVYTNPNGLFPWERFGMESALQILFAASVIHPDLFQVDMVSEVQ
DFYKEFVGIDLTKEEAQNMINGYGPNGETYT
>Mature_351_residues
MMKKFLLILVSLVLILTISAAGCVDVSQSPSNRTITDMNGAEVVIPAEINTVVNLWPASNSVMLCMGAGDKLIGTTSFTK
SLYWSQKVYPAIVDVPVGTDNVEELLALSPDLIITPQKATAEKLRAAGLPAICLMFSDYDTMKQAFGILGEALGGDYVEK
AAKWSDLVDENKARVQAAIGDIPEDEKPVVYYIQGQSNQGLYATFSANSIMEDWTETAGGIFASTRLNLTGNTASAEEVL
ALNPDVIIIGGPAQHELYDELMASEEWKEINAVKNGRVYTNPNGLFPWERFGMESALQILFAASVIHPDLFQVDMVSEVQ
DFYKEFVGIDLTKEEAQNMINGYGPNGETYT

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 38217; Mature: 38217

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKFLLILVSLVLILTISAAGCVDVSQSPSNRTITDMNGAEVVIPAEINTVVNLWPASN
CHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEECCCCEEEEECCCCEEEEEEECCC
SVMLCMGAGDKLIGTTSFTKSLYWSQKVYPAIVDVPVGTDNVEELLALSPDLIITPQKAT
CEEEEEECCCCEEECHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEEECCHHH
AEKLRAAGLPAICLMFSDYDTMKQAFGILGEALGGDYVEKAAKWSDLVDENKARVQAAIG
HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHC
DIPEDEKPVVYYIQGQSNQGLYATFSANSIMEDWTETAGGIFASTRLNLTGNTASAEEVL
CCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEE
ALNPDVIIIGGPAQHELYDELMASEEWKEINAVKNGRVYTNPNGLFPWERFGMESALQIL
EECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCHHHHHHHH
FAASVIHPDLFQVDMVSEVQDFYKEFVGIDLTKEEAQNMINGYGPNGETYT
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMKKFLLILVSLVLILTISAAGCVDVSQSPSNRTITDMNGAEVVIPAEINTVVNLWPASN
CHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEECCCCEEEEECCCCEEEEEEECCC
SVMLCMGAGDKLIGTTSFTKSLYWSQKVYPAIVDVPVGTDNVEELLALSPDLIITPQKAT
CEEEEEECCCCEEECHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEEECCHHH
AEKLRAAGLPAICLMFSDYDTMKQAFGILGEALGGDYVEKAAKWSDLVDENKARVQAAIG
HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHC
DIPEDEKPVVYYIQGQSNQGLYATFSANSIMEDWTETAGGIFASTRLNLTGNTASAEEVL
CCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEE
ALNPDVIIIGGPAQHELYDELMASEEWKEINAVKNGRVYTNPNGLFPWERFGMESALQIL
EECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHCHHHHHHHH
FAASVIHPDLFQVDMVSEVQDFYKEFVGIDLTKEEAQNMINGYGPNGETYT
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]