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The map label for this gene is ydfJ [H]

Identifier: 124486521

GI number: 124486521

Start: 1744073

End: 1746139

Strand: Reverse

Name: ydfJ [H]

Synonym: Mlab_1709

Alternate gene names: 124486521

Gene position: 1746139-1744073 (Counterclockwise)

Preceding gene: 124486523

Following gene: 124486520

Centisome position: 96.74

GC content: 50.31

Gene sequence:

>2067_bases
ATGATAGACATATCCGGAACCATCCTGCAAAAAAGAAAACAGGTTATTATCATAACCCTGCTGATCGCCGTTCTCTGTCT
GATTCTGATACCGCAGGTCTCCGTAAACTACAATATCATTGATTATCTCCCCGATGAAGCTCCCTCGACCATCGCTCTTG
ATGTGATGAACGAGGAGTTCACGCAAGGGGTGCCCAATGCACGTATTATGGTGCCGGACATCACGATACCGGAAGCACTT
GAACTGAAAAAACAATTCGCTGCCGTCGACGGTGTCGAAGAGGTAACATGGCTCGATGATGCCGTCTCTCTTGACGTACC
GTTCGAAACCCTCGACACAGATGCCGTCGAAGCGTATTACAAAAACAACACCGCCCTTTTCAGCATCACCCTCGACAATG
AAAAAGCCACTTCCGCCGTCAACGAACTTGCAGAACTTGCCGGTGACGATGCCGCCATGTCGGGCCTCTCCGTCTCCTCG
ACCTTCTCGAAAGGAACGCTTTCAAGCGATATCGTCAAGATCTTCCTGATTGCAATACCTTTCATCCTTGCCATTCTCTT
CCTGACGACCACTTCATGGTTCGAACCTTTTCTCCTGATGTTCACGATAGGAGTTGCCATCGTCATCAACATGGGAACCA
ATATCATATTCGGAGAAATATCGTTCATCACGCAGGGAGTTGCGGCCATTCTGCAGCTTGCAATCGCTCTTGATTACGGA
ATCTTCGTTTTGTACCGGTTCACCGAGATCCGCAAAGACGGGATCCCGGTCTTTGAATCGATGAAGCATGCCCTCGTCAA
ATCCATAGGCTCGGTCACCGCATGCGGTATTGCCACGCTGATCGGTTTTGCCGCCCTTATCCTGATGAGAATCCAGATCG
GTCCGGATCTTGGCCTTGTTCTGACGAAGGGAATCGTCATCAGTCTTCTCTGCGTTTTCACGCTTCTGCCGGCGCTCACG
CTTGTCTGCAGCAAACTCATCGAAAAGACTCAGCACCGTCCGTTCATTCCCGATCTGAGAAAACTCGCAAAGTGCCTCGT
CAAATTAAGCTTCCCCGCTCTCATCATCTTTGCCCTGATCGTGATACCTTCGGTTATCGCCATCGAAAACAACGATTATG
TCTACTTCGATCTCTTCTCCGACGAACGGACAGCTATCGGTCAGGATGCCATAGCGATCACTGATACCTTCGGTGGGGCC
TCCTCTCTTGTCCTCATGGTCCAGAAGGGGAATCTCGCAGAAGAGCAGGAAGTGCTTGATCAAATCGAAGAGATACCCAA
TGTTGTGTCGGTGATATCCTACGTGGGCACAGTCGGTGCGGAAATTCCGCAGGAGTATGTCCCTGGAAGCACCCTGTCCG
AACTGGAATCCGCCAACTACAGCAGGATGATCATCACCGTCGACACCTCTCTCGAAGATCCCGAATCCTTTGCGGCGATT
GAAAATATCCGGGCTATCGGTGAAGAGCATTATCCCGGGGAATGGTATCTGGCAGGAGAGATCGCCAACGCTTACGATAT
GAAATCGTTTATCGAAGAGGATAATATCAAAATCGAGGCGGTCGGCATCATTGCGATCTGCATCGTCATTCTGATAGCAT
TCCAATCCATCTCCCTCCCACTGATCCTCGTTCTCGTCATCAAATCGGCGATCTGGATCAACTGCGCAATACCCTACTTC
CAGGGAGAGCCGATGTTCTACATCTCGTATCTGGTCATCAGTTCTCTCCAGCTCGGCATTACTGTCGATTACGCGATTAT
GTTTACCAGCCGGTATGTTGAGTTTAGAAAGCTTCACCCCAAGCGGGAGGCCGTCGAGCTGACCATCTCGAAGGCGGCGG
TCTCGATTCTCGTCTCCGCCTTCATTCTTCTGGTAGCCGGTCTTGCCTTGTGGATCTTCTCCTCGAATGCTCTCTTAAGC
GAAGTTGGGATGCTTGTTGGCCGAGGGTCAATCCTTTCGATCCTTGCAGTACTGTTCGTCCTGCCGGCTCTTCTCCTGAT
CTTCGATAAGATCATCCAGAAAACATCTCTGAACATGCAGTTTGTGCCTGATACAACAGGAGTATAA

Upstream 100 bases:

>100_bases
ACATCATTAGACACCTGTCGCATTTTGTCGAAAATTCAAGATGTTTATCACAAATTCAGGGAGACATATTCAGACAACCG
GTTAAACGGCTGCTTTTCCT

Downstream 100 bases:

>100_bases
CATGAAATCATTGGTAAAAATTCTCATAACCCTGATAATAATCACATTATTCATCGTCCCGGCCGCTGCGGCCGGAACAC
AAAAAGAAGAAGTCATCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MIDISGTILQKRKQVIIITLLIAVLCLILIPQVSVNYNIIDYLPDEAPSTIALDVMNEEFTQGVPNARIMVPDITIPEAL
ELKKQFAAVDGVEEVTWLDDAVSLDVPFETLDTDAVEAYYKNNTALFSITLDNEKATSAVNELAELAGDDAAMSGLSVSS
TFSKGTLSSDIVKIFLIAIPFILAILFLTTTSWFEPFLLMFTIGVAIVINMGTNIIFGEISFITQGVAAILQLAIALDYG
IFVLYRFTEIRKDGIPVFESMKHALVKSIGSVTACGIATLIGFAALILMRIQIGPDLGLVLTKGIVISLLCVFTLLPALT
LVCSKLIEKTQHRPFIPDLRKLAKCLVKLSFPALIIFALIVIPSVIAIENNDYVYFDLFSDERTAIGQDAIAITDTFGGA
SSLVLMVQKGNLAEEQEVLDQIEEIPNVVSVISYVGTVGAEIPQEYVPGSTLSELESANYSRMIITVDTSLEDPESFAAI
ENIRAIGEEHYPGEWYLAGEIANAYDMKSFIEEDNIKIEAVGIIAICIVILIAFQSISLPLILVLVIKSAIWINCAIPYF
QGEPMFYISYLVISSLQLGITVDYAIMFTSRYVEFRKLHPKREAVELTISKAAVSILVSAFILLVAGLALWIFSSNALLS
EVGMLVGRGSILSILAVLFVLPALLLIFDKIIQKTSLNMQFVPDTTGV

Sequences:

>Translated_688_residues
MIDISGTILQKRKQVIIITLLIAVLCLILIPQVSVNYNIIDYLPDEAPSTIALDVMNEEFTQGVPNARIMVPDITIPEAL
ELKKQFAAVDGVEEVTWLDDAVSLDVPFETLDTDAVEAYYKNNTALFSITLDNEKATSAVNELAELAGDDAAMSGLSVSS
TFSKGTLSSDIVKIFLIAIPFILAILFLTTTSWFEPFLLMFTIGVAIVINMGTNIIFGEISFITQGVAAILQLAIALDYG
IFVLYRFTEIRKDGIPVFESMKHALVKSIGSVTACGIATLIGFAALILMRIQIGPDLGLVLTKGIVISLLCVFTLLPALT
LVCSKLIEKTQHRPFIPDLRKLAKCLVKLSFPALIIFALIVIPSVIAIENNDYVYFDLFSDERTAIGQDAIAITDTFGGA
SSLVLMVQKGNLAEEQEVLDQIEEIPNVVSVISYVGTVGAEIPQEYVPGSTLSELESANYSRMIITVDTSLEDPESFAAI
ENIRAIGEEHYPGEWYLAGEIANAYDMKSFIEEDNIKIEAVGIIAICIVILIAFQSISLPLILVLVIKSAIWINCAIPYF
QGEPMFYISYLVISSLQLGITVDYAIMFTSRYVEFRKLHPKREAVELTISKAAVSILVSAFILLVAGLALWIFSSNALLS
EVGMLVGRGSILSILAVLFVLPALLLIFDKIIQKTSLNMQFVPDTTGV
>Mature_688_residues
MIDISGTILQKRKQVIIITLLIAVLCLILIPQVSVNYNIIDYLPDEAPSTIALDVMNEEFTQGVPNARIMVPDITIPEAL
ELKKQFAAVDGVEEVTWLDDAVSLDVPFETLDTDAVEAYYKNNTALFSITLDNEKATSAVNELAELAGDDAAMSGLSVSS
TFSKGTLSSDIVKIFLIAIPFILAILFLTTTSWFEPFLLMFTIGVAIVINMGTNIIFGEISFITQGVAAILQLAIALDYG
IFVLYRFTEIRKDGIPVFESMKHALVKSIGSVTACGIATLIGFAALILMRIQIGPDLGLVLTKGIVISLLCVFTLLPALT
LVCSKLIEKTQHRPFIPDLRKLAKCLVKLSFPALIIFALIVIPSVIAIENNDYVYFDLFSDERTAIGQDAIAITDTFGGA
SSLVLMVQKGNLAEEQEVLDQIEEIPNVVSVISYVGTVGAEIPQEYVPGSTLSELESANYSRMIITVDTSLEDPESFAAI
ENIRAIGEEHYPGEWYLAGEIANAYDMKSFIEEDNIKIEAVGIIAICIVILIAFQSISLPLILVLVIKSAIWINCAIPYF
QGEPMFYISYLVISSLQLGITVDYAIMFTSRYVEFRKLHPKREAVELTISKAAVSILVSAFILLVAGLALWIFSSNALLS
EVGMLVGRGSILSILAVLFVLPALLLIFDKIIQKTSLNMQFVPDTTGV

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 75104; Mature: 75104

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDISGTILQKRKQVIIITLLIAVLCLILIPQVSVNYNIIDYLPDEAPSTIALDVMNEEF
CCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEHHHHH
TQGVPNARIMVPDITIPEALELKKQFAAVDGVEEVTWLDDAVSLDVPFETLDTDAVEAYY
HCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEECCCHHHCCHHHHHHHC
KNNTALFSITLDNEKATSAVNELAELAGDDAAMSGLSVSSTFSKGTLSSDIVKIFLIAIP
CCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHHH
FILAILFLTTTSWFEPFLLMFTIGVAIVINMGTNIIFGEISFITQGVAAILQLAIALDYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
IFVLYRFTEIRKDGIPVFESMKHALVKSIGSVTACGIATLIGFAALILMRIQIGPDLGLV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LTKGIVISLLCVFTLLPALTLVCSKLIEKTQHRPFIPDLRKLAKCLVKLSFPALIIFALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
VIPSVIAIENNDYVYFDLFSDERTAIGQDAIAITDTFGGASSLVLMVQKGNLAEEQEVLD
HHCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHH
QIEEIPNVVSVISYVGTVGAEIPQEYVPGSTLSELESANYSRMIITVDTSLEDPESFAAI
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHH
ENIRAIGEEHYPGEWYLAGEIANAYDMKSFIEEDNIKIEAVGIIAICIVILIAFQSISLP
HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCHH
LILVLVIKSAIWINCAIPYFQGEPMFYISYLVISSLQLGITVDYAIMFTSRYVEFRKLHP
HHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHCCC
KREAVELTISKAAVSILVSAFILLVAGLALWIFSSNALLSEVGMLVGRGSILSILAVLFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
LPALLLIFDKIIQKTSLNMQFVPDTTGV
HHHHHHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MIDISGTILQKRKQVIIITLLIAVLCLILIPQVSVNYNIIDYLPDEAPSTIALDVMNEEF
CCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEHHHHH
TQGVPNARIMVPDITIPEALELKKQFAAVDGVEEVTWLDDAVSLDVPFETLDTDAVEAYY
HCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEECCCHHHCCHHHHHHHC
KNNTALFSITLDNEKATSAVNELAELAGDDAAMSGLSVSSTFSKGTLSSDIVKIFLIAIP
CCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHHH
FILAILFLTTTSWFEPFLLMFTIGVAIVINMGTNIIFGEISFITQGVAAILQLAIALDYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
IFVLYRFTEIRKDGIPVFESMKHALVKSIGSVTACGIATLIGFAALILMRIQIGPDLGLV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LTKGIVISLLCVFTLLPALTLVCSKLIEKTQHRPFIPDLRKLAKCLVKLSFPALIIFALI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
VIPSVIAIENNDYVYFDLFSDERTAIGQDAIAITDTFGGASSLVLMVQKGNLAEEQEVLD
HHCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHH
QIEEIPNVVSVISYVGTVGAEIPQEYVPGSTLSELESANYSRMIITVDTSLEDPESFAAI
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHH
ENIRAIGEEHYPGEWYLAGEIANAYDMKSFIEEDNIKIEAVGIIAICIVILIAFQSISLP
HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCHH
LILVLVIKSAIWINCAIPYFQGEPMFYISYLVISSLQLGITVDYAIMFTSRYVEFRKLHP
HHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHCCC
KREAVELTISKAAVSILVSAFILLVAGLALWIFSSNALLSEVGMLVGRGSILSILAVLFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
LPALLLIFDKIIQKTSLNMQFVPDTTGV
HHHHHHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]