| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486518
Identifier: 124486518
GI number: 124486518
Start: 1740406
End: 1741317
Strand: Reverse
Name: 124486518
Synonym: Mlab_1706
Alternate gene names: NA
Gene position: 1741317-1740406 (Counterclockwise)
Preceding gene: 124486519
Following gene: 124486517
Centisome position: 96.47
GC content: 51.43
Gene sequence:
>912_bases ATGTTAGAAAACGCAGGCGTCGATTATTCCGATCCGCAGAACTGGCTGTATTTCCCGGAGATCGCGAAACCGGTGGATAT ATTTTATGTGTATCCAACTGTAAGTAGCCATGAATCTGGGTCTATGCCCATCGCGGATGAAGGGGACAGGGCCCTTGCCC GGGCTTTTTCCACAACCGAGGCAAGCGTGTATGAACCGTACGGGAATGTATTCACGCCGTATTACCGTCAGATGACAACG CGGGTCAAAATGGAGGATGAAGATCAGTTCATCACCGACACCAAAGCGTTCAAGCAAGGGGCCCGCGACATTCAGGATGC ATTCGAGTATTACCTTGAGCACCTCAATGCTGGTAGGCCGTTCATTCTTGCCGGCCACAGTCAGGGAACGATGACCCTTA TCGAACTTATCAAAAACCGGTTCGGGGACGACGAAGAACTGCGAAGCCGTCTGATCGCCGCGTATCTGATTGGTTATACG GTAACAGATGACGATCTTCAAAAAGCAGGTCTGACCGCGGCAAAAGGTGCGTTTGATACCGGTGTTGTGATCACCTACAA CACCCAGTCTCCGTCGGCAGTCGGCAGCTTCGTTCTTATGGAAGGAGCAAACTGCATCAATCCGCTGAACTGGACGACCG ATTCGACCTATGCTCCCGCTTCGGAAAATCTCGGCGCAAGGTTCTACAATTTTGAAACGGGAGAGTTCCTGCGTGAAGTC ATCCATTACGCCGACGCCCGAATAGATATGAAAACCGGGGCACTTACGGCCACGATCCCGGCGGACGAGAAGCTGGATCT CGGACCGTATTTCCCGGATGGCGTCTATCATATGTTTGACTATGCATTCTGGTACAGAAACCTTCAGCAGAATGTCGGCG ACAGGATCAACGCGTATCTTCTGAAAACCTAA
Upstream 100 bases:
>100_bases CGCATTTCTTCTTTAACCCCCATTTTTTCAGGATAAACTTCCCGGTTTCACAAACACATTATATACCTGAGGAGCCTGTA TTATCTGTAAGGTCTTCATT
Downstream 100 bases:
>100_bases AAGCGGCCCTTCTTTACCCGCCCTATTTTTCCCGGCCGAAGGGCCCGCTGATGAATTTTGCGGTTTTGCAAATAGATTAT TTACCAGAGGAGACTGTATT
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MLENAGVDYSDPQNWLYFPEIAKPVDIFYVYPTVSSHESGSMPIADEGDRALARAFSTTEASVYEPYGNVFTPYYRQMTT RVKMEDEDQFITDTKAFKQGARDIQDAFEYYLEHLNAGRPFILAGHSQGTMTLIELIKNRFGDDEELRSRLIAAYLIGYT VTDDDLQKAGLTAAKGAFDTGVVITYNTQSPSAVGSFVLMEGANCINPLNWTTDSTYAPASENLGARFYNFETGEFLREV IHYADARIDMKTGALTATIPADEKLDLGPYFPDGVYHMFDYAFWYRNLQQNVGDRINAYLLKT
Sequences:
>Translated_303_residues MLENAGVDYSDPQNWLYFPEIAKPVDIFYVYPTVSSHESGSMPIADEGDRALARAFSTTEASVYEPYGNVFTPYYRQMTT RVKMEDEDQFITDTKAFKQGARDIQDAFEYYLEHLNAGRPFILAGHSQGTMTLIELIKNRFGDDEELRSRLIAAYLIGYT VTDDDLQKAGLTAAKGAFDTGVVITYNTQSPSAVGSFVLMEGANCINPLNWTTDSTYAPASENLGARFYNFETGEFLREV IHYADARIDMKTGALTATIPADEKLDLGPYFPDGVYHMFDYAFWYRNLQQNVGDRINAYLLKT >Mature_303_residues MLENAGVDYSDPQNWLYFPEIAKPVDIFYVYPTVSSHESGSMPIADEGDRALARAFSTTEASVYEPYGNVFTPYYRQMTT RVKMEDEDQFITDTKAFKQGARDIQDAFEYYLEHLNAGRPFILAGHSQGTMTLIELIKNRFGDDEELRSRLIAAYLIGYT VTDDDLQKAGLTAAKGAFDTGVVITYNTQSPSAVGSFVLMEGANCINPLNWTTDSTYAPASENLGARFYNFETGEFLREV IHYADARIDMKTGALTATIPADEKLDLGPYFPDGVYHMFDYAFWYRNLQQNVGDRINAYLLKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34142; Mature: 34142
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLENAGVDYSDPQNWLYFPEIAKPVDIFYVYPTVSSHESGSMPIADEGDRALARAFSTTE CCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCC ASVYEPYGNVFTPYYRQMTTRVKMEDEDQFITDTKAFKQGARDIQDAFEYYLEHLNAGRP CHHCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FILAGHSQGTMTLIELIKNRFGDDEELRSRLIAAYLIGYTVTDDDLQKAGLTAAKGAFDT EEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHCCCCCC GVVITYNTQSPSAVGSFVLMEGANCINPLNWTTDSTYAPASENLGARFYNFETGEFLREV CEEEEECCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH IHYADARIDMKTGALTATIPADEKLDLGPYFPDGVYHMFDYAFWYRNLQQNVGDRINAYL HHHHCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE LKT ECC >Mature Secondary Structure MLENAGVDYSDPQNWLYFPEIAKPVDIFYVYPTVSSHESGSMPIADEGDRALARAFSTTE CCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCC ASVYEPYGNVFTPYYRQMTTRVKMEDEDQFITDTKAFKQGARDIQDAFEYYLEHLNAGRP CHHCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FILAGHSQGTMTLIELIKNRFGDDEELRSRLIAAYLIGYTVTDDDLQKAGLTAAKGAFDT EEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHCCCCCC GVVITYNTQSPSAVGSFVLMEGANCINPLNWTTDSTYAPASENLGARFYNFETGEFLREV CEEEEECCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH IHYADARIDMKTGALTATIPADEKLDLGPYFPDGVYHMFDYAFWYRNLQQNVGDRINAYL HHHHCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE LKT ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA