| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486517
Identifier: 124486517
GI number: 124486517
Start: 1739376
End: 1740287
Strand: Reverse
Name: 124486517
Synonym: Mlab_1705
Alternate gene names: NA
Gene position: 1740287-1739376 (Counterclockwise)
Preceding gene: 124486518
Following gene: 124486516
Centisome position: 96.42
GC content: 52.19
Gene sequence:
>912_bases ATGTCTGAAAAAGCAGGCGTCGATTATTCCGATCCTTACAACTGGCTGTATCTCCCTGGGATCTCGAAAGAGGTTGACGT TTTTTACGTATATCCAACGGTGAGCAGCCATGAATCAGGTTCGATGCCCATCGCTGATGAAGGGGACCGGGCCCTTGCCC GGGGATTTTCTGCAACCGAGGCAAGCGTCTATGAGCCGTACGGGAATGTATTCGCGCCGTATTACCGTCAGATGACATCA CGGGTCAAGATGGAGGATGACGATAAACTCATCTCCGACACGAAAGCGTTCAAACAGGGAGCCCGTGACATTCAGGACGC ATTCGAGTATTACCTCGAACACTTCAGCGGCGGCCGGCCGTTCATTCTTGCCGGACACAGTCAGGGAACAATGACCCTTA TCGAACTTATCAAAAACCGGTTCGGGGGCGATGAAGAACTGCGAAGCCGTCTGATCGCTGCGTATCTTATCGGTTACACG GTAACGGATGACGATCTTCAAAAAGCAGGTCTCACCGCGGCTGGTGGTGCCTACGACACGGGTGTTGTGATCACCTACAA CACCCAGTCTCCGTCAGCGGTCGGCAGCTTCGTTCTTATGGAAGGGGCAAAATGCATCAATCCTTTGAACTGGAAGACCG ATTCCACGTATGCTCCCGCCACGGAGAATCTCGGCGCACGGTTCTACAATGTTGAAACTGGGGAGTTCCTGCGTGAGGTC ATCCATTACGCCGATGCCCAGATCGATCCGAAAACCGGAGCGCTTATGGCCACGATCCCGGCAGATGAGGATCTGGAGCC CCTACCATATTTCCCCAAAGGCGTCTATCATAGATACGATTATGCATTCTGGTACAGAAACCTTCAGCAGAATGTCGGCG ACAGAATCAATATCTATCTCCAGAAAAGGTAG
Upstream 100 bases:
>100_bases CGCCCTATTTTTCCCGGCCGAAGGGCCCGCTGATGAATTTTGCGGTTTTGCAAATAGATTATTTACCAGAGGAGACTGTA TTAACTGTAAGGTCTTCATT
Downstream 100 bases:
>100_bases GGGGAGCGGTTCATCCAGGCCCTCTGATTTTTTGAGGAAACCGGCTTTTTTGCAGAAAACCCGGTTAACCGGATTTCTTT TCCCGAGAGCAACTATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSEKAGVDYSDPYNWLYLPGISKEVDVFYVYPTVSSHESGSMPIADEGDRALARGFSATEASVYEPYGNVFAPYYRQMTS RVKMEDDDKLISDTKAFKQGARDIQDAFEYYLEHFSGGRPFILAGHSQGTMTLIELIKNRFGGDEELRSRLIAAYLIGYT VTDDDLQKAGLTAAGGAYDTGVVITYNTQSPSAVGSFVLMEGAKCINPLNWKTDSTYAPATENLGARFYNVETGEFLREV IHYADAQIDPKTGALMATIPADEDLEPLPYFPKGVYHRYDYAFWYRNLQQNVGDRINIYLQKR
Sequences:
>Translated_303_residues MSEKAGVDYSDPYNWLYLPGISKEVDVFYVYPTVSSHESGSMPIADEGDRALARGFSATEASVYEPYGNVFAPYYRQMTS RVKMEDDDKLISDTKAFKQGARDIQDAFEYYLEHFSGGRPFILAGHSQGTMTLIELIKNRFGGDEELRSRLIAAYLIGYT VTDDDLQKAGLTAAGGAYDTGVVITYNTQSPSAVGSFVLMEGAKCINPLNWKTDSTYAPATENLGARFYNVETGEFLREV IHYADAQIDPKTGALMATIPADEDLEPLPYFPKGVYHRYDYAFWYRNLQQNVGDRINIYLQKR >Mature_302_residues SEKAGVDYSDPYNWLYLPGISKEVDVFYVYPTVSSHESGSMPIADEGDRALARGFSATEASVYEPYGNVFAPYYRQMTSR VKMEDDDKLISDTKAFKQGARDIQDAFEYYLEHFSGGRPFILAGHSQGTMTLIELIKNRFGGDEELRSRLIAAYLIGYTV TDDDLQKAGLTAAGGAYDTGVVITYNTQSPSAVGSFVLMEGAKCINPLNWKTDSTYAPATENLGARFYNVETGEFLREVI HYADAQIDPKTGALMATIPADEDLEPLPYFPKGVYHRYDYAFWYRNLQQNVGDRINIYLQKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34005; Mature: 33874
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKAGVDYSDPYNWLYLPGISKEVDVFYVYPTVSSHESGSMPIADEGDRALARGFSATE CCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCC ASVYEPYGNVFAPYYRQMTSRVKMEDDDKLISDTKAFKQGARDIQDAFEYYLEHFSGGRP CHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FILAGHSQGTMTLIELIKNRFGGDEELRSRLIAAYLIGYTVTDDDLQKAGLTAAGGAYDT EEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC GVVITYNTQSPSAVGSFVLMEGAKCINPLNWKTDSTYAPATENLGARFYNVETGEFLREV CEEEEECCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH IHYADAQIDPKTGALMATIPADEDLEPLPYFPKGVYHRYDYAFWYRNLQQNVGDRINIYL HHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE QKR ECC >Mature Secondary Structure SEKAGVDYSDPYNWLYLPGISKEVDVFYVYPTVSSHESGSMPIADEGDRALARGFSATE CCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCC ASVYEPYGNVFAPYYRQMTSRVKMEDDDKLISDTKAFKQGARDIQDAFEYYLEHFSGGRP CHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FILAGHSQGTMTLIELIKNRFGGDEELRSRLIAAYLIGYTVTDDDLQKAGLTAAGGAYDT EEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC GVVITYNTQSPSAVGSFVLMEGAKCINPLNWKTDSTYAPATENLGARFYNVETGEFLREV CEEEEECCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH IHYADAQIDPKTGALMATIPADEDLEPLPYFPKGVYHRYDYAFWYRNLQQNVGDRINIYL HHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE QKR ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA