| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486499
Identifier: 124486499
GI number: 124486499
Start: 1723278
End: 1723796
Strand: Reverse
Name: 124486499
Synonym: Mlab_1687
Alternate gene names: NA
Gene position: 1723796-1723278 (Counterclockwise)
Preceding gene: 124486502
Following gene: 124486498
Centisome position: 95.5
GC content: 57.23
Gene sequence:
>519_bases ATGACGGAAACGATCCCCTATGAGGTCACCGGGAAAGAAGGAGAGATCGAGTTTCGAAAGTATCCTGCACTTGTGCTCGC AACGGTCGAGAGTGCGGGGGACGATTCGGGGTTCAATCTTCTGTTTGCCTATATTTCGGGAAAGAATGCCGCGAAGGATT CTCTGCAGATGACCGCTCCGGTGATCACGTCGGCAAAGATCCCGATGACGGCGCCGGTCGTTTCCAACGCCTCGACGATG TCGTTTGTGATGCCGCCCGGAAAAACTTCTGGCGAGATCCCCGAGCCGCTGGACAGTAAGGTTCGGATCGTTCCGGTGCC CGAGCGGGAGATCGCGGTCATCGCTTTTAAGGGGAAGACCCATGATGAGGAGGTGAAGGAAGTTGAGGGCCGGCTCTTAA AAGGGCTTCGTGACGCGGGGATCGAGGCGGCGGGAGAGGTGTTTTTGATGCGGTATAATCCGCCGTGGATCCCGGGATTC CTACGGCATAACGAGGTAGGGGTGGAGGTTAGGCGGTGA
Upstream 100 bases:
>100_bases TAATCTATTTCGTGGCTGGAACGAAGCAGGATAGTATGACGATCGATACAATTACACTGCCCGAATCTTCGATCTCCCTC ATTTTTGGAGGGCTCGGATC
Downstream 100 bases:
>100_bases GCCGGGGTCAGAGTTGAAAAGAAAACTCGGGTGATACGCTGCGTCCATTTTCTTCCCGACTCACCACATTTCCCGTCAAT TACGTATTTTCTTATATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTETIPYEVTGKEGEIEFRKYPALVLATVESAGDDSGFNLLFAYISGKNAAKDSLQMTAPVITSAKIPMTAPVVSNASTM SFVMPPGKTSGEIPEPLDSKVRIVPVPEREIAVIAFKGKTHDEEVKEVEGRLLKGLRDAGIEAAGEVFLMRYNPPWIPGF LRHNEVGVEVRR
Sequences:
>Translated_172_residues MTETIPYEVTGKEGEIEFRKYPALVLATVESAGDDSGFNLLFAYISGKNAAKDSLQMTAPVITSAKIPMTAPVVSNASTM SFVMPPGKTSGEIPEPLDSKVRIVPVPEREIAVIAFKGKTHDEEVKEVEGRLLKGLRDAGIEAAGEVFLMRYNPPWIPGF LRHNEVGVEVRR >Mature_171_residues TETIPYEVTGKEGEIEFRKYPALVLATVESAGDDSGFNLLFAYISGKNAAKDSLQMTAPVITSAKIPMTAPVVSNASTMS FVMPPGKTSGEIPEPLDSKVRIVPVPEREIAVIAFKGKTHDEEVKEVEGRLLKGLRDAGIEAAGEVFLMRYNPPWIPGFL RHNEVGVEVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18759; Mature: 18628
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETIPYEVTGKEGEIEFRKYPALVLATVESAGDDSGFNLLFAYISGKNAAKDSLQMTAP CCCCCCEEEECCCCCEEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEECC VITSAKIPMTAPVVSNASTMSFVMPPGKTSGEIPEPLDSKVRIVPVPEREIAVIAFKGKT EEECCCCCEECCEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCC HDEEVKEVEGRLLKGLRDAGIEAAGEVFLMRYNPPWIPGFLRHNEVGVEVRR CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCEEEEC >Mature Secondary Structure TETIPYEVTGKEGEIEFRKYPALVLATVESAGDDSGFNLLFAYISGKNAAKDSLQMTAP CCCCCEEEECCCCCEEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEECC VITSAKIPMTAPVVSNASTMSFVMPPGKTSGEIPEPLDSKVRIVPVPEREIAVIAFKGKT EEECCCCCEECCEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCC HDEEVKEVEGRLLKGLRDAGIEAAGEVFLMRYNPPWIPGFLRHNEVGVEVRR CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA