| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is ubiG [H]
Identifier: 124486498
GI number: 124486498
Start: 1722296
End: 1723159
Strand: Reverse
Name: ubiG [H]
Synonym: Mlab_1686
Alternate gene names: 124486498
Gene position: 1723159-1722296 (Counterclockwise)
Preceding gene: 124486499
Following gene: 124486496
Centisome position: 95.47
GC content: 48.03
Gene sequence:
>864_bases ATGGAGTTATTACCGATAGGAAACGTGCATAATCATACGTCTGAAGAGAGTCTGAAGATGCTGCCTTTATGGAGACAGGC AATTAGCGGTATTGATTTCGCAGATGCAGATGACGGATTTTTTACAGAGAAGTATTCTCATTATATAATAACGCACGACC CCCTTTGCGTTACGTTCCCTTCGGGTAAAGAGGAACTGAACAAAAGATTCTGCGCCGGTCTTGGGACTTCCGTTGTCAGC TACATCAGAAAGGAGGGAAATATGCATTACGTGCGGGGGTTGATGGCCGAGAACGGTGCGAATATCTACAGCATCGCTCC GTATACCTATTTTGACCGGGTGGAGGAGGCGCAGTTTCCGCAAAGTTACATGGAGCCGAGGAAGATGCGGGCTTTTGCCG AGGTTCTTCCTCTTCTTTCGGGAAAGAATATCCTCGATGTAGGGTGCGGTCTTGGCACGCTTGCAATCAAAATAGCGGAG GCAAAGCCGGAATCTCTTGTATACGGGATCGATCTGCTTGAGAGTTCTGTCGAACAGTCCAAATTGAATGCAGAGGTTGA AGGTGTGGCGAATACCCGATTTGTGGTGGCCAATACGTATGAGCTGCCTTTCGAGGAGGGATATTTCGATTCTGTGGTCT GTATTTTTATGCTGCATCATCTGGATGATATCCCGGGAGCACTGCGGGATATCAAACGGGTCCTGAAGCCTTCGGGTGAA GTGTTTGCGGTGGAGCCTATCGATCATTTCCATGATGTGCAGCGATATCCCGATGACTGGAAGGAACTTTTCCGTGATGC AGGGTATGAGGTTGAGGTCTGGGAGAAGGATAATATCTCGTTCATCCGTGCTTGTCTGAAATAA
Upstream 100 bases:
>100_bases AAGAAAACTCGGGTGATACGCTGCGTCCATTTTCTTCCCGACTCACCACATTTCCCGTCAATTACGTATTTTCTTATATA AAGGCCGTGAATGAATATTC
Downstream 100 bases:
>100_bases GAGGCAAAAACAGTAAATCAGATGCGAGGGGAGGGATTCGAACCCGCGAACTCCTTGAGAGCAGATCTTGAGTCAGCCTC CGTTGGCCACTTGGATACCC
Product: hypothetical protein
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MELLPIGNVHNHTSEESLKMLPLWRQAISGIDFADADDGFFTEKYSHYIITHDPLCVTFPSGKEELNKRFCAGLGTSVVS YIRKEGNMHYVRGLMAENGANIYSIAPYTYFDRVEEAQFPQSYMEPRKMRAFAEVLPLLSGKNILDVGCGLGTLAIKIAE AKPESLVYGIDLLESSVEQSKLNAEVEGVANTRFVVANTYELPFEEGYFDSVVCIFMLHHLDDIPGALRDIKRVLKPSGE VFAVEPIDHFHDVQRYPDDWKELFRDAGYEVEVWEKDNISFIRACLK
Sequences:
>Translated_287_residues MELLPIGNVHNHTSEESLKMLPLWRQAISGIDFADADDGFFTEKYSHYIITHDPLCVTFPSGKEELNKRFCAGLGTSVVS YIRKEGNMHYVRGLMAENGANIYSIAPYTYFDRVEEAQFPQSYMEPRKMRAFAEVLPLLSGKNILDVGCGLGTLAIKIAE AKPESLVYGIDLLESSVEQSKLNAEVEGVANTRFVVANTYELPFEEGYFDSVVCIFMLHHLDDIPGALRDIKRVLKPSGE VFAVEPIDHFHDVQRYPDDWKELFRDAGYEVEVWEKDNISFIRACLK >Mature_287_residues MELLPIGNVHNHTSEESLKMLPLWRQAISGIDFADADDGFFTEKYSHYIITHDPLCVTFPSGKEELNKRFCAGLGTSVVS YIRKEGNMHYVRGLMAENGANIYSIAPYTYFDRVEEAQFPQSYMEPRKMRAFAEVLPLLSGKNILDVGCGLGTLAIKIAE AKPESLVYGIDLLESSVEQSKLNAEVEGVANTRFVVANTYELPFEEGYFDSVVCIFMLHHLDDIPGALRDIKRVLKPSGE VFAVEPIDHFHDVQRYPDDWKELFRDAGYEVEVWEKDNISFIRACLK
Specific function: Ubiquinone biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 32543; Mature: 32543
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLPIGNVHNHTSEESLKMLPLWRQAISGIDFADADDGFFTEKYSHYIITHDPLCVTFP CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEECCCEEEECC SGKEELNKRFCAGLGTSVVSYIRKEGNMHYVRGLMAENGANIYSIAPYTYFDRVEEAQFP CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC QSYMEPRKMRAFAEVLPLLSGKNILDVGCGLGTLAIKIAEAKPESLVYGIDLLESSVEQS HHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH KLNAEVEGVANTRFVVANTYELPFEEGYFDSVVCIFMLHHLDDIPGALRDIKRVLKPSGE HCCCHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC VFAVEPIDHFHDVQRYPDDWKELFRDAGYEVEVWEKDNISFIRACLK EEEECCHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHC >Mature Secondary Structure MELLPIGNVHNHTSEESLKMLPLWRQAISGIDFADADDGFFTEKYSHYIITHDPLCVTFP CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEECCCEEEECC SGKEELNKRFCAGLGTSVVSYIRKEGNMHYVRGLMAENGANIYSIAPYTYFDRVEEAQFP CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC QSYMEPRKMRAFAEVLPLLSGKNILDVGCGLGTLAIKIAEAKPESLVYGIDLLESSVEQS HHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH KLNAEVEGVANTRFVVANTYELPFEEGYFDSVVCIFMLHHLDDIPGALRDIKRVLKPSGE HCCCHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC VFAVEPIDHFHDVQRYPDDWKELFRDAGYEVEVWEKDNISFIRACLK EEEECCHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA