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The map label for this gene is dtdA

Identifier: 124486400

GI number: 124486400

Start: 1617030

End: 1618361

Strand: Reverse

Name: dtdA

Synonym: Mlab_1586

Alternate gene names: 124486400

Gene position: 1618361-1617030 (Counterclockwise)

Preceding gene: 124486401

Following gene: 124486399

Centisome position: 89.66

GC content: 54.28

Gene sequence:

>1332_bases
ATGATTATTGATATACTGAACTCCGACTCGGACCCGGCCGGGCGAAATATCCGGGCAGCTATCGACGAACTTTTGAAAAA
TCCGCCGGAGGGGGGTTTCCCTCTTTTCGACGGGAACGAGGTGACGTTTCACACTGTTTCAGGCCGGATCATCCATGCGG
AAAAATCCGCGGTGAACCCTGATGCGGATCTGATCATTGTTGTTTCGCGTCATTCAAGTGTGAATCCGGTTCCTGTTCTG
ACGGTCCATCCGGCAGGGAACTTCGGTATCGCGGGGCTTGGCGGCAACGACCGGGAACTGGGTCTGACGAGTCCTGCCTG
GATGAAGTCGATTCTGCAGAACCACGCCGAGTTCGTTCCGGAAGGGTACCGGGTCTCGTACGAGATCACGCATCACGGGC
CGACGGATTTTCCGGTCCCGTTCTTTTTTGTCGAGGTGGGGAGTACGGAAAAAGAGTGGAACGATCCCGCAGCCTGTATT
GCGGCGGCAAAAAGCGTTCTGTATGCCCGCCCTTCGCCGGAGATTGTCCCTCTGATCGGGTTTGGCGGTACGCATTATGC
GGTCCGGCAGACGGCGATCGGTCTCGAGACGAAGGGAGCATTTGGGCATATGATGCATACCCGGGATGTCGGTTCGGTTT
CCAAAGAGATGGTGTCCCAGATGATCGCAAAATCGTGCGGGGTGTTTGCCGCGCATATCGACCGGAAAGCTCTGTCAAAG
CAGGAGATCTCCCATATCGAAGGGATACTTGCTGAAGTCGGGCTGGAGGAGATCACCGAAGGCGATCTGCGGAAAATGAA
CGCGATGTCTTTTTCGACCTGGGTCGCCTATCGCGATCTGGCCGCTTTGCAGGCTCCCGGTCTGAAAATATTCCCGCACG
GCAGAATCTTTGACGGAGACCCGGCCGTGGTCGAACTTCCGTCTGATCTGTTTTCCGCAGCATTTCTCGGCTATGAGGAG
ATTTTCCTTGCTGAGCTGGACAAAATGGGAAATATTTTTCACACGACCGGAAAAGGCGGCAGACTTATGCCGACTTTGCT
GACTTCTGCAAAAAACAGGCAGAAGGTATCAGGTGATTTAATAGTCTTATCCGTTCAACAAATAACACGTACACAGGATA
GTTTGGTGGAAGGTGATCAAATCACGATAGCCCGCCGGCAGTTCGACCCCGTGCTCGCGCGCACGCTCGGGGTCCCGTCA
GGTCCGTTATACGGGCAGCTTGTTGCCGGAAAACCCGTGACTCTTCCCGACGGCAGAATGATCACGCCGGATATGGTCAC
GAAAGTGGTCAGGACATCCATCAAAATACCGGGATTGGAGAATTACTCATGA

Upstream 100 bases:

>100_bases
AACGGGGCCGTTACGCTTTTCATCTATCTCGTCCACATCCCGGTGATATTCGTCATTCTCTGGATCTTCTCTTCCCTGAC
GGGAATTGGGTATTTGTGAT

Downstream 100 bases:

>100_bases
GATCAATTGTAGAAGAAGCATTATCACGCAAACGGTTCGAAGACGTTGCACGCGACGACACGCCGGTTTCCGCAATTTAC
GACGCAGAAACCGAAGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MIIDILNSDSDPAGRNIRAAIDELLKNPPEGGFPLFDGNEVTFHTVSGRIIHAEKSAVNPDADLIIVVSRHSSVNPVPVL
TVHPAGNFGIAGLGGNDRELGLTSPAWMKSILQNHAEFVPEGYRVSYEITHHGPTDFPVPFFFVEVGSTEKEWNDPAACI
AAAKSVLYARPSPEIVPLIGFGGTHYAVRQTAIGLETKGAFGHMMHTRDVGSVSKEMVSQMIAKSCGVFAAHIDRKALSK
QEISHIEGILAEVGLEEITEGDLRKMNAMSFSTWVAYRDLAALQAPGLKIFPHGRIFDGDPAVVELPSDLFSAAFLGYEE
IFLAELDKMGNIFHTTGKGGRLMPTLLTSAKNRQKVSGDLIVLSVQQITRTQDSLVEGDQITIARRQFDPVLARTLGVPS
GPLYGQLVAGKPVTLPDGRMITPDMVTKVVRTSIKIPGLENYS

Sequences:

>Translated_443_residues
MIIDILNSDSDPAGRNIRAAIDELLKNPPEGGFPLFDGNEVTFHTVSGRIIHAEKSAVNPDADLIIVVSRHSSVNPVPVL
TVHPAGNFGIAGLGGNDRELGLTSPAWMKSILQNHAEFVPEGYRVSYEITHHGPTDFPVPFFFVEVGSTEKEWNDPAACI
AAAKSVLYARPSPEIVPLIGFGGTHYAVRQTAIGLETKGAFGHMMHTRDVGSVSKEMVSQMIAKSCGVFAAHIDRKALSK
QEISHIEGILAEVGLEEITEGDLRKMNAMSFSTWVAYRDLAALQAPGLKIFPHGRIFDGDPAVVELPSDLFSAAFLGYEE
IFLAELDKMGNIFHTTGKGGRLMPTLLTSAKNRQKVSGDLIVLSVQQITRTQDSLVEGDQITIARRQFDPVLARTLGVPS
GPLYGQLVAGKPVTLPDGRMITPDMVTKVVRTSIKIPGLENYS
>Mature_443_residues
MIIDILNSDSDPAGRNIRAAIDELLKNPPEGGFPLFDGNEVTFHTVSGRIIHAEKSAVNPDADLIIVVSRHSSVNPVPVL
TVHPAGNFGIAGLGGNDRELGLTSPAWMKSILQNHAEFVPEGYRVSYEITHHGPTDFPVPFFFVEVGSTEKEWNDPAACI
AAAKSVLYARPSPEIVPLIGFGGTHYAVRQTAIGLETKGAFGHMMHTRDVGSVSKEMVSQMIAKSCGVFAAHIDRKALSK
QEISHIEGILAEVGLEEITEGDLRKMNAMSFSTWVAYRDLAALQAPGLKIFPHGRIFDGDPAVVELPSDLFSAAFLGYEE
IFLAELDKMGNIFHTTGKGGRLMPTLLTSAKNRQKVSGDLIVLSVQQITRTQDSLVEGDQITIARRQFDPVLARTLGVPS
GPLYGQLVAGKPVTLPDGRMITPDMVTKVVRTSIKIPGLENYS

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)

COG id: COG1650

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dtdA deacylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DTDA_METLZ (A2STU3)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001031016.1
- ProteinModelPortal:   A2STU3
- SMR:   A2STU3
- STRING:   A2STU3
- GeneID:   4794667
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_1586
- eggNOG:   arNOG10590
- HOGENOM:   HBG541820
- OMA:   MECTHHG
- ProtClustDB:   PRK14866
- BioCyc:   MLAB410358:MLAB_1586-MONOMER
- HAMAP:   MF_00562
- InterPro:   IPR007508

Pfam domain/function: PF04414 tRNA_deacylase

EC number: NA

Molecular weight: Translated: 47911; Mature: 47911

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDILNSDSDPAGRNIRAAIDELLKNPPEGGFPLFDGNEVTFHTVSGRIIHAEKSAVNP
CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCEEEEEEECCEEEEECCCCCCC
DADLIIVVSRHSSVNPVPVLTVHPAGNFGIAGLGGNDRELGLTSPAWMKSILQNHAEFVP
CCCEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
EGYRVSYEITHHGPTDFPVPFFFVEVGSTEKEWNDPAACIAAAKSVLYARPSPEIVPLIG
CCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEE
FGGTHYAVRQTAIGLETKGAFGHMMHTRDVGSVSKEMVSQMIAKSCGVFAAHIDRKALSK
CCCCCHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QEISHIEGILAEVGLEEITEGDLRKMNAMSFSTWVAYRDLAALQAPGLKIFPHGRIFDGD
HHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCC
PAVVELPSDLFSAAFLGYEEIFLAELDKMGNIFHTTGKGGRLMPTLLTSAKNRQKVSGDL
CCEEECCHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHCCCCCCCCCCCE
IVLSVQQITRTQDSLVEGDQITIARRQFDPVLARTLGVPSGPLYGQLVAGKPVTLPDGRM
EEEEHHHHHCCHHHHCCCCEEEEEHHHCCHHHHHHCCCCCCCCCEEEECCCCEECCCCCE
ITPDMVTKVVRTSIKIPGLENYS
ECHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIIDILNSDSDPAGRNIRAAIDELLKNPPEGGFPLFDGNEVTFHTVSGRIIHAEKSAVNP
CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCCEEEEEEECCEEEEECCCCCCC
DADLIIVVSRHSSVNPVPVLTVHPAGNFGIAGLGGNDRELGLTSPAWMKSILQNHAEFVP
CCCEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
EGYRVSYEITHHGPTDFPVPFFFVEVGSTEKEWNDPAACIAAAKSVLYARPSPEIVPLIG
CCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEE
FGGTHYAVRQTAIGLETKGAFGHMMHTRDVGSVSKEMVSQMIAKSCGVFAAHIDRKALSK
CCCCCHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QEISHIEGILAEVGLEEITEGDLRKMNAMSFSTWVAYRDLAALQAPGLKIFPHGRIFDGD
HHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCC
PAVVELPSDLFSAAFLGYEEIFLAELDKMGNIFHTTGKGGRLMPTLLTSAKNRQKVSGDL
CCEEECCHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHCCCCCCCCCCCE
IVLSVQQITRTQDSLVEGDQITIARRQFDPVLARTLGVPSGPLYGQLVAGKPVTLPDGRM
EEEEHHHHHCCHHHHCCCCEEEEEHHHCCHHHHHHCCCCCCCCCEEEECCCCEECCCCCE
ITPDMVTKVVRTSIKIPGLENYS
ECHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA