| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486401
Identifier: 124486401
GI number: 124486401
Start: 1618363
End: 1619196
Strand: Reverse
Name: 124486401
Synonym: Mlab_1587
Alternate gene names: NA
Gene position: 1619196-1618363 (Counterclockwise)
Preceding gene: 124486402
Following gene: 124486400
Centisome position: 89.71
GC content: 49.52
Gene sequence:
>834_bases ATGGGTGGTGAAGTACGGGAATATGATGATTCGATCCTTACCGAGTCTGGAGACTCGCAGAGTTCCAAGAGCGGAAGATA CTGGGAAATAGATGCTATCCGCGGGATCGCAATCCTTGGCATGCTGTTTTACCATCTCCTCGCCTGTCTTGTTTTGTTCC ATATAATCGTCGAGGATCCGAACTTCCTTTCCTATTATAATACGTATATGTTCGGGTCGGGAGTCTTCGTTCTTCTTGCG GGTATCGCGATGATCCTTCGTCATGAACGGATGCGGGGAAGAACGACAAAGGAATACTACCTGGCTCTGGTCATCAAGGC GATGTTTCTTCTGGCTCTCGGTTTCTGTATTACCATCGGCAGCTGGATCGGGGCTTCGCTTTTTCTCGGCAGCGAGGCAT TTATCAAGTTCGGTTTTCTGCATATGCTTGGTGTATCCATGCTTTTGGCGATCCCTCTCCTTAGATACGGGAGATGGAAC ATCATCCTTGGTCTGATTATCATCGCGATCGGGGCGTTTATCTTCCCGTACATCAATGATCCGTCCTGGCTGTATCCTTT GGGCATCCATGCCGAGGATTTCATGCAGTATACGCAGGATTATTTCCCGCTGTTCCCCTGGTTTGGCGTGCTTCTTTTAG GGGTCGGTCTTGGAACCGTTTTCTATCCAAACGGCAGGCGCAGTTTTACCATCCGGGAACCTGGAAAAATCGGGGAGGCT TTTGCGAAACTCGGGAACGGGGCCGTTACGCTTTTCATCTATCTCGTCCACATCCCGGTGATATTCGTCATTCTCTGGAT CTTCTCTTCCCTGACGGGAATTGGGTATTTGTGA
Upstream 100 bases:
>100_bases TCTTTGTAATGCTGTGGATTTTGAGCGTGACGACCGGCATCGGGTATGTTTAGTCGTCCAGAAATTACTTAGATATACAA AAACCAATATGAAGGGAACA
Downstream 100 bases:
>100_bases TATGATTATTGATATACTGAACTCCGACTCGGACCCGGCCGGGCGAAATATCCGGGCAGCTATCGACGAACTTTTGAAAA ATCCGCCGGAGGGGGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDPNFLSYYNTYMFGSGVFVLLA GIAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIGSWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWN IILGLIIIAIGAFIFPYINDPSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEA FAKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL
Sequences:
>Translated_277_residues MGGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDPNFLSYYNTYMFGSGVFVLLA GIAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIGSWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWN IILGLIIIAIGAFIFPYINDPSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEA FAKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL >Mature_276_residues GGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDPNFLSYYNTYMFGSGVFVLLAG IAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIGSWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWNI ILGLIIIAIGAFIFPYINDPSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEAF AKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31169; Mature: 31038
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDP CCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NFLSYYNTYMFGSGVFVLLAGIAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWNIILGLIIIAIGAFIFPYIND HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC PSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEA CCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHH FAKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDP CCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NFLSYYNTYMFGSGVFVLLAGIAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWNIILGLIIIAIGAFIFPYIND HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC PSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEA CCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHH FAKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA